178 Open source projects that are alternatives of or similar to NeuroCore.jl

A lightweight python module to interact with atlases for systems neuroscience

The NeuroMorph analysis and visualization toolkit

A virtual optogenetics laboratory

The Arbor multi-compartment neural network simulation library.

fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.

A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.

📊 Gene expression in neuroexpresso database

code for storing neurodata images and image annotations

FSL-R Interface package

C++ library for simulation of multiscale neural field dynamics

PyoMyo - Python Opensource Myo armband library

BIDScoin converts your source-level neuroimaging data to BIDS

Collaborative Annotation Toolkit for Massive Amounts of Image Data

Uncertainpy: a Python toolbox for uncertainty quantification and sensitivity analysis, tailored towards computational neuroscience.

Coordinate- and image-based meta-analysis in Python

Recordings of 10k neurons during spontaneous behaviors

🔧🧠 MEEGkit: MEG & EEG processing toolkit in Python 🧠🔧

3D Visualization of Brain MRI

Code related to Neuroimaging Analysis Replication and Prediction Study

Framework for the reproducible processing of neuroimaging data with deep learning methods

A framework for developing neural network models for 3D image processing.

Just Another Tool for Online Studies

TAPAS - Translational Algorithms for Psychiatry-Advancing Science

Visualizer for large-scale and interactive ray-tracing of neurons

MATLAB / Octave tools for BIDS datasets

Mother of All BCI Benchmarks

Deep learning in a spiking neural network using segregated dendrites.

Spiking neural network system

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠

An R package for experimental psychologists

a python based software for visualization of neuroanatomical and morphological data.

Distributed, Versioned, Image-oriented Dataservice

AntroPy: entropy and complexity of (EEG) time-series in Python

A multi-purpose GPU-accelerated open-source suite for brain data visualization

NEURON User Interface

Helping researchers in routine procedures for data collection

MNE-CPP: A Framework for Electrophysiology

Parameterizing neural power spectra into periodic & aperiodic components.

Brain extraction in presence of abnormalities, using single and multiple MRI modalities

Fast spike sorting with drift correction for up to a thousand channels

Automated 3D cell detection and registration of whole-brain images

EntroPy: complexity of time-series in Python (DEPRECATED)

Time series visualizer and data processing tools for Electrocorticography (ECoG) signals stored in NWB files, for Python.

Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data

Code and data for Zhang, Lengersdorff et al. (2020)

Deep Learning with Tensor Flow for EEG MNE Epoch Objects

Connectome Workbench

Brain Dynamics Programming in Python

python implementations of Analyzing Neural Time Series Textbook

STAGIN: Spatio-Temporal Attention Graph Isomorphism Network

Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.

Automated 3D brain registration with support for multiple species and atlases.

Resources for data driven neuroscientists.

Platform-independent lightweight Python library for designing and conducting timing-critical behavioural and neuroimaging experiments

Nuerapse simulations for SNNs

Database for experimental neuroscience laboratories

Data and example scripts used in the paper `Inferring hidden structure in multilayered neural circuits`

A table containing imaging analysis tools for biology, with a focus on calcium imaging.

Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)

Example with Cortex V2 API