GitPlanet

Cheap and reliable Node.js hosting starts at $3/month, and $1/month static HTML hosting

Created with love in Canada, visit hostnodejs.com today

Feel like to post an Ad? Learn Details
All Projects → esi-neuroscience → syncopy

esi-neuroscience / syncopy

Licence: BSD-3-Clause License
Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data

Programming Languages

python
139335 projects - #7 most used programming language

Labels

analysisneurosciencecomputational-neurosciencebrainecogspectral-methodssystems-neuroscience

Projects that are alternatives of or similar to syncopy

PyRhO
A virtual optogenetics laboratory
Stars: ✭ 30 (+57.89%)
Mutual labels:  neuroscience, computational-neuroscience, brain
Fieldtrip
The MATLAB toolbox for MEG, EEG and iEEG analysis
Stars: ✭ 481 (+2431.58%)
Mutual labels:  analysis, neuroscience, brain
CCN Association
认知计算神经联盟 讨论会
Stars: ✭ 49 (+157.89%)
Mutual labels:  neuroscience, computational-neuroscience
brainreg
Automated 3D brain registration with support for multiple species and atlases.
Stars: ✭ 73 (+284.21%)
Mutual labels:  neuroscience, brain
ColeAnticevicNetPartition
Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)
Stars: ✭ 48 (+152.63%)
Mutual labels:  neuroscience, brain
Analyzing neural time series
python implementations of Analyzing Neural Time Series Textbook
Stars: ✭ 117 (+515.79%)
Mutual labels:  analysis, neuroscience
Pyllusion
A Parametric Framework to Generate Visual Illusions using Python
Stars: ✭ 35 (+84.21%)
Mutual labels:  neuroscience, brain
NEURON-UI
NEURON User Interface
Stars: ✭ 14 (-26.32%)
Mutual labels:  neuroscience, brain
Brayns
Visualizer for large-scale and interactive ray-tracing of neurons
Stars: ✭ 232 (+1121.05%)
Mutual labels:  neuroscience, brain
HumanPilot
Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project
Stars: ✭ 22 (+15.79%)
Mutual labels:  analysis, brain
neuronunit
A package for data-driven validation of neuron and ion channel models using SciUnit
Stars: ✭ 36 (+89.47%)
Mutual labels:  neuroscience, computational-neuroscience
Mne Cpp
MNE-CPP: A Framework for Electrophysiology
Stars: ✭ 104 (+447.37%)
Mutual labels:  analysis, neuroscience
threeBrain
3D Visualization of Brain MRI
Stars: ✭ 29 (+52.63%)
Mutual labels:  brain, ecog
brian2cuda
A brian2 extension to simulate spiking neural networks on GPUs
Stars: ✭ 46 (+142.11%)
Mutual labels:  neuroscience, computational-neuroscience
Open Computational Neuroscience Resources
A publicly-editable collection of open computational neuroscience resources
Stars: ✭ 234 (+1131.58%)
Mutual labels:  neuroscience, brain
BrainPy
Brain Dynamics Programming in Python
Stars: ✭ 242 (+1173.68%)
Mutual labels:  neuroscience, computational-neuroscience
Mne Python
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
Stars: ✭ 1,766 (+9194.74%)
Mutual labels:  neuroscience, ecog
Visbrain
A multi-purpose GPU-accelerated open-source suite for brain data visualization
Stars: ✭ 172 (+805.26%)
Mutual labels:  neuroscience, brain
hnn
The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on circuit mechanisms underlying EEG/MEG data.
Stars: ✭ 62 (+226.32%)
Mutual labels:  computational-neuroscience, brain
MIRACL
Multi-modal Image Registration And Connectivity anaLysis
Stars: ✭ 23 (+21.05%)
Mutual labels:  neuroscience, brain
View All Similar Projects ➔

Syncopy-Logo

Systems Neuroscience Computing in Python

Conda Version PyPI version License

master branch status: Master Tests Master Coverage

dev branch status: Dev Tests Dev Coverage

Syncopy aims to be a user-friendly toolkit for large-scale electrophysiology data-analysis in Python. We strive to achieve the following goals:

  1. Syncopy is a fully open source Python environment for electrophysiology data analysis.
  2. Syncopy is scalable and built for very large datasets. It automatically makes use of available computing resources and is developed with built-in parallelism in mind.
  3. Syncopy is compatible with FieldTrip. Data and results can be loaded into MATLAB and Python, parameter names and function call syntax are as similar as possible

Syncopy is developed at the Ernst Strüngmann Institute (ESI) gGmbH for Neuroscience in Cooperation with Max Planck Society and released free of charge under the BSD 3-Clause "New" or "Revised" License.

Contact

To report bugs or ask questions please use our GitHub issue tracker. For general inquiries please contact syncopy (at) esi-frankfurt.de.

Installation

Syncopy is available on pip

pip install esi-syncopy

For using SynCoPy's parallel processing capabilities, ACME is required

conda install -c conda-forge esi-acme

To get the latest development version, please clone our GitHub repository:

git clone https://github.com/esi-neuroscience/syncopy.git
cd syncopy/
pip install -e .

Getting Started

Please visit our online documentation.

Note that the project description data, including the texts, logos, images, and/or trademarks, for each open source project belongs to its rightful owner. If you wish to add or remove any projects, please contact us at [email protected].