ngs-in-biocA course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor
Stars: ✭ 37 (-7.5%)
bactmapA mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
Stars: ✭ 36 (-10%)
kirby-previewfiles💪 A Kirby field to enable file thumbnail preview in the panel sidebar
Stars: ✭ 35 (-12.5%)
panoptesMonitor computational workflows in real time
Stars: ✭ 45 (+12.5%)
STingUltrafast sequence typing and gene detection from NGS raw reads
Stars: ✭ 15 (-62.5%)
langx-javaJava tools, helper, common utilities. A replacement of guava, apache-commons, hutool
Stars: ✭ 50 (+25%)
cherry-on-pyCloud computing is a game changer for developers. What can you do in a couple hundred lines of code?
Stars: ✭ 67 (+67.5%)
anoranor: an annotation and visualization system based on R and Shiny framework
Stars: ✭ 28 (-30%)
allotmentA React component for resizable split views
Stars: ✭ 359 (+797.5%)
recountR package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
Stars: ✭ 40 (+0%)
BetterDiscordPanel💬 Discord Messaging Panel that allows you to message inside of a bot!
Stars: ✭ 512 (+1180%)
pipelinePipelines using goroutines
Stars: ✭ 46 (+15%)
rna-seq-kallisto-sleuthA Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
Stars: ✭ 56 (+40%)
SpicyTaco.AutoGridA magical replacement for the built in WPF Grid and StackPanel
Stars: ✭ 67 (+67.5%)
boardA complete admin board template with a large variety of elements and components, based on blexar CSS framework.
Stars: ✭ 55 (+37.5%)
UnityGUIUGUI Panel Systems for navigation, animation and more
Stars: ✭ 80 (+100%)
zenhub-pipelineAutomatically transfer issues in pipeline by commit message
Stars: ✭ 14 (-65%)
electron-panelManipulate panels in window for Electron.
Stars: ✭ 14 (-65%)
cmdcMaya Python API 3.0
Stars: ✭ 98 (+145%)
nextNEOpinextNEOpi: a comprehensive pipeline for computational neoantigen prediction
Stars: ✭ 42 (+5%)
vue-modalA customizable, stackable, and lightweight modal component for Vue.
Stars: ✭ 96 (+140%)
nemesystGeneralised and highly customisable, hybrid-parallelism, database based, deep learning framework.
Stars: ✭ 17 (-57.5%)
PairfqSync paired-end FASTA/Q files and keep singleton reads
Stars: ✭ 18 (-55%)
AnimationDNAMaya > Arnold > Nuke pipeline
Stars: ✭ 101 (+152.5%)
LTRpredDe novo annotation of young retrotransposons
Stars: ✭ 35 (-12.5%)
PeekingDuckA modular framework built to simplify Computer Vision inference workloads.
Stars: ✭ 143 (+257.5%)
streamalgExtensible stream pipelines with object algebras.
Stars: ✭ 26 (-35%)
MGSEMapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.
Stars: ✭ 22 (-45%)
KubePiKubePi 是一个现代化的 K8s 面板。
Stars: ✭ 1,513 (+3682.5%)
makepipeTools for constructing simple make-like pipelines in R.
Stars: ✭ 23 (-42.5%)
pipeFunctional Pipeline in Go
Stars: ✭ 30 (-25%)
runiacRun IaC Anywhere With Ease
Stars: ✭ 18 (-55%)
recentrifugeRecentrifuge: robust comparative analysis and contamination removal for metagenomics
Stars: ✭ 79 (+97.5%)
pachinkomodular pluggable media sorter
Stars: ✭ 27 (-32.5%)
pd3f🏭 PDF text extraction pipeline: self-hosted, local-first, Docker-based
Stars: ✭ 132 (+230%)
tpackPack a Go workflow/function as a Unix-style pipeline command
Stars: ✭ 55 (+37.5%)
SharpPanelC# Admin Control Panel Finder For Windows
Stars: ✭ 34 (-15%)
BACTpipeBACTpipe: An assembly and annotation pipeline for bacterial genomics
Stars: ✭ 19 (-52.5%)
electron-dockabledockable panel for electron (work in progress...)
Stars: ✭ 50 (+25%)
pipelineRDA chain of responsability pattern implementation in .NET that supports retry policy, sync and async steps, rollback, pipeline recovery by cache and visual documentation using diagrams.
Stars: ✭ 19 (-52.5%)
PanelA Snapchat inspired ScrollView Controller Written in Swift
Stars: ✭ 22 (-45%)
nullarbor💾 📃 "Reads to report" for public health and clinical microbiology
Stars: ✭ 111 (+177.5%)
assume-role-arn🤖🎩assume-role-arn allows you to easily assume an AWS IAM role in your CI/CD pipelines, without worrying about external dependencies.
Stars: ✭ 54 (+35%)
gofastHigh performance transport protocol for distributed applications.
Stars: ✭ 19 (-52.5%)
frizzleThe magic message bus
Stars: ✭ 14 (-65%)
HTGSThe Hybrid Task Graph Scheduler API
Stars: ✭ 36 (-10%)
cljamA DNA Sequence Alignment/Map (SAM) library for Clojure
Stars: ✭ 85 (+112.5%)
snakefmtThe uncompromising Snakemake code formatter
Stars: ✭ 78 (+95%)
naas⚙️ Schedule notebooks, run them like APIs, expose securely your assets: Jupyter as a viable ⚡️ Production environment
Stars: ✭ 219 (+447.5%)
aiopanelAn asyncio text-based panel
Stars: ✭ 20 (-50%)
docsDocumentation of the Snakemake-Workflows project
Stars: ✭ 123 (+207.5%)
tibannaTibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.
Stars: ✭ 61 (+52.5%)
dentistClose assembly gaps using long-reads at high accuracy.
Stars: ✭ 39 (-2.5%)
rmonadPipelines you can compute on
Stars: ✭ 66 (+65%)
dolphinnextA graphical user interface for distributed data processing of high throughput genomics
Stars: ✭ 92 (+130%)