All Projects → pipeComp → Similar Projects or Alternatives

489 Open source projects that are alternatives of or similar to pipeComp

scarf
Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.
Stars: ✭ 54 (+42.11%)
Mutual labels:  clustering, single-cell-rna-seq
Mlj.jl
A Julia machine learning framework
Stars: ✭ 982 (+2484.21%)
Mutual labels:  clustering, pipelines
DBSCAN
c++ implementation of clustering by DBSCAN
Stars: ✭ 89 (+134.21%)
Mutual labels:  clustering
BiocPkgTools
Computable build reports, package metadata, and download stats from the Bioconductor project
Stars: ✭ 20 (-47.37%)
Mutual labels:  bioconductor
TCGAbiolinksGUI
TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/
Stars: ✭ 32 (-15.79%)
Mutual labels:  bioconductor
IntroduceToEclicpseVert.x
This repository contains the code of Vert.x examples contained in my articles published on platforms such as kodcu.com, medium, dzone. How to run each example is described in its readme file.
Stars: ✭ 27 (-28.95%)
Mutual labels:  clustering
RcppML
Rcpp Machine Learning: Fast robust NMF, divisive clustering, and more
Stars: ✭ 52 (+36.84%)
Mutual labels:  clustering
MAL-Map
Cluster and visualize relationships between anime on MyAnimeList
Stars: ✭ 201 (+428.95%)
Mutual labels:  clustering
xslweb
Web application framework for XSLT and XQuery developers
Stars: ✭ 39 (+2.63%)
Mutual labels:  pipelines
rabbitmq-peer-discovery-consul
Consul-based peer discovery backend for RabbitMQ 3.7.0+
Stars: ✭ 39 (+2.63%)
Mutual labels:  clustering
aws-customer-churn-pipeline
An End to End Customer Churn Prediction solution using AWS services.
Stars: ✭ 30 (-21.05%)
Mutual labels:  pipelines
DESOM
🌐 Deep Embedded Self-Organizing Map: Joint Representation Learning and Self-Organization
Stars: ✭ 76 (+100%)
Mutual labels:  clustering
EgoSplitting
A NetworkX implementation of "Ego-splitting Framework: from Non-Overlapping to Overlapping Clusters" (KDD 2017).
Stars: ✭ 78 (+105.26%)
Mutual labels:  clustering
ensembldb
This is the ensembldb development repository.
Stars: ✭ 31 (-18.42%)
Mutual labels:  bioconductor
text clustering
文本聚类(Kmeans、DBSCAN、LDA、Single-pass)
Stars: ✭ 230 (+505.26%)
Mutual labels:  clustering
A-quantum-inspired-genetic-algorithm-for-k-means-clustering
Implementation of a Quantum inspired genetic algorithm proposed by A quantum-inspired genetic algorithm for k-means clustering paper.
Stars: ✭ 28 (-26.32%)
Mutual labels:  clustering
devops-101
Intro to DevOps from scratch.
Stars: ✭ 57 (+50%)
Mutual labels:  pipelines
Taiji
All-in-one analysis pipeline
Stars: ✭ 28 (-26.32%)
Mutual labels:  single-cell-rna-seq
TrajectoryTracking
Trajectory Tracking Project
Stars: ✭ 16 (-57.89%)
Mutual labels:  clustering
connectomemapper3
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.
Stars: ✭ 45 (+18.42%)
Mutual labels:  pipelines
myprofile
Generate your resume easily from Github actions ✅ using discussion section 📃 🚀
Stars: ✭ 19 (-50%)
Mutual labels:  pipelines
ChRIS ultron backEnd
Backend for ChRIS
Stars: ✭ 28 (-26.32%)
Mutual labels:  pipelines
clueminer
interactive clustering platform
Stars: ✭ 13 (-65.79%)
Mutual labels:  clustering
ngs-in-bioc
A course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor
Stars: ✭ 37 (-2.63%)
Mutual labels:  bioconductor
fsfc
Feature Selection for Clustering
Stars: ✭ 80 (+110.53%)
Mutual labels:  clustering
snATAC
<<------ Use SnapATAC!!
Stars: ✭ 23 (-39.47%)
Mutual labels:  clustering
scicloj.ml
A Clojure machine learning library
Stars: ✭ 152 (+300%)
Mutual labels:  clustering
scSeqR
This package has migrated to https://github.com/rezakj/iCellR please use iCellR instead of scSeqR for more functionalities and updates.
Stars: ✭ 16 (-57.89%)
Mutual labels:  clustering
Clustering4Ever
C4E, a JVM friendly library written in Scala for both local and distributed (Spark) Clustering.
Stars: ✭ 126 (+231.58%)
Mutual labels:  clustering
kohonen-maps
Implementation of SOM and GSOM
Stars: ✭ 62 (+63.16%)
Mutual labels:  clustering
clustering-python
Different clustering approaches applied on different problemsets
Stars: ✭ 36 (-5.26%)
Mutual labels:  clustering
arshamg-scrnaseq-wgan
Wasserstein Generative Adversarial Network for analysing scRNAseq data
Stars: ✭ 33 (-13.16%)
Mutual labels:  single-cell-rna-seq
bioc 2020 tidytranscriptomics
Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
Stars: ✭ 25 (-34.21%)
Mutual labels:  bioconductor
cellrank
CellRank for directed single-cell fate mapping
Stars: ✭ 222 (+484.21%)
Mutual labels:  single-cell-rna-seq
eris-fleet
Cluster management for Discord bots using the Eris library.
Stars: ✭ 38 (+0%)
Mutual labels:  clustering
rabbitmq-clusterer
This project is ABANDONWARE. Use https://www.rabbitmq.com/cluster-formation.html instead.
Stars: ✭ 72 (+89.47%)
Mutual labels:  clustering
clusterix
Visual exploration of clustered data.
Stars: ✭ 44 (+15.79%)
Mutual labels:  clustering
FixedEffectjlr
R interface for Fixed Effect Models
Stars: ✭ 20 (-47.37%)
Mutual labels:  clustering
scaden
Deep Learning based cell composition analysis with Scaden.
Stars: ✭ 61 (+60.53%)
Mutual labels:  single-cell-rna-seq
qsiprep
Preprocessing and reconstruction of diffusion MRI
Stars: ✭ 94 (+147.37%)
Mutual labels:  pipelines
Revisiting-Contrastive-SSL
Revisiting Contrastive Methods for Unsupervised Learning of Visual Representations. [NeurIPS 2021]
Stars: ✭ 81 (+113.16%)
Mutual labels:  clustering
mleap
R Interface to MLeap
Stars: ✭ 24 (-36.84%)
Mutual labels:  pipelines
RBioFormats
📚 R interface to the Bio-Formats library
Stars: ✭ 20 (-47.37%)
Mutual labels:  bioconductor
NNet
algorithm for study: multi-layer-perceptron, cluster-graph, cnn, rnn, restricted boltzmann machine, bayesian network
Stars: ✭ 24 (-36.84%)
Mutual labels:  clustering
ssdc
ssdeep cluster analysis for malware files
Stars: ✭ 24 (-36.84%)
Mutual labels:  clustering
tsp-essay
A fun study of some heuristics for the Travelling Salesman Problem.
Stars: ✭ 15 (-60.53%)
Mutual labels:  clustering
northstar
Single cell type annotation guided by cell atlases, with freedom to be queer
Stars: ✭ 23 (-39.47%)
Mutual labels:  clustering
ExpressionMatrix2
Software for exploration of gene expression data from single-cell RNA sequencing.
Stars: ✭ 29 (-23.68%)
Mutual labels:  clustering
recount
R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
Stars: ✭ 40 (+5.26%)
Mutual labels:  bioconductor
scCODA
A Bayesian model for compositional single-cell data analysis
Stars: ✭ 109 (+186.84%)
Mutual labels:  single-cell-rna-seq
syncflux
SyncFlux is an Open Source InfluxDB Data synchronization and replication tool for migration purposes or HA clusters
Stars: ✭ 145 (+281.58%)
Mutual labels:  clustering
pypmc
Clustering with variational Bayes and population Monte Carlo
Stars: ✭ 46 (+21.05%)
Mutual labels:  clustering
NNM
The PyTorch official implementation of the CVPR2021 Poster Paper NNM: Nearest Neighbor Matching for Deep Clustering.
Stars: ✭ 46 (+21.05%)
Mutual labels:  clustering
openshift-starter-guides
Getting Started with OpenShift for Developers Workshop
Stars: ✭ 35 (-7.89%)
Mutual labels:  pipelines
Heart disease prediction
Heart Disease prediction using 5 algorithms
Stars: ✭ 43 (+13.16%)
Mutual labels:  clustering
Pottslab
Unsupervised multilabel image segmentation (color/gray/multichannel) based on the Potts model (aka piecewise constant Mumford-Shah model)
Stars: ✭ 97 (+155.26%)
Mutual labels:  clustering
swanager
A high-level Docker Services management tool built on top of Swarm
Stars: ✭ 12 (-68.42%)
Mutual labels:  clustering
mathematics-statistics-for-data-science
Mathematical & Statistical topics to perform statistical analysis and tests; Linear Regression, Probability Theory, Monte Carlo Simulation, Statistical Sampling, Bootstrapping, Dimensionality reduction techniques (PCA, FA, CCA), Imputation techniques, Statistical Tests (Kolmogorov Smirnov), Robust Estimators (FastMCD) and more in Python and R.
Stars: ✭ 56 (+47.37%)
Mutual labels:  clustering
Nebulosa
R package to visualize gene expression data based on weighted kernel density estimation
Stars: ✭ 50 (+31.58%)
Mutual labels:  single-cell-rna-seq
microarray-analysis
Materials on the analysis of microarray expression data; focus on re-analysis of public data ( http://tinyurl.com/cruk-microarray)
Stars: ✭ 44 (+15.79%)
Mutual labels:  bioconductor
1-60 of 489 similar projects