All Projects → ProteinSecondaryStructure-CNN → Similar Projects or Alternatives

119 Open source projects that are alternatives of or similar to ProteinSecondaryStructure-CNN

RamaNet
Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
Stars: ✭ 41 (-50%)
Mutual labels:  pdb, protein-structure
hPDB
PDB parser in Haskell
Stars: ✭ 20 (-75.61%)
Mutual labels:  pdb, protein-structure
MolArt
MOLeculAR structure annoTator
Stars: ✭ 25 (-69.51%)
Mutual labels:  pdb, protein-structure
VSCoding-Sequence
VSCode Extension for interactively visualising protein structure data in the editor
Stars: ✭ 41 (-50%)
Mutual labels:  pdb, protein-structure
chimera-framework
Simple Language Agnostic Framework for Stand Alone and Distributed Computing
Stars: ✭ 17 (-79.27%)
Mutual labels:  chain
parapred
Paratope Prediction using Deep Learning
Stars: ✭ 49 (-40.24%)
Mutual labels:  protein-structure
Rmsd
Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format
Stars: ✭ 215 (+162.2%)
Mutual labels:  pdb
Fakepdb
Tool for PDB generation from IDA Pro database
Stars: ✭ 186 (+126.83%)
Mutual labels:  pdb
do
Simplest way to manage asynchronicity
Stars: ✭ 33 (-59.76%)
Mutual labels:  chain
mmterm
View proteins and trajectories in the terminal
Stars: ✭ 87 (+6.1%)
Mutual labels:  protein-structure
Pudb
Full-screen console debugger for Python
Stars: ✭ 2,267 (+2664.63%)
Mutual labels:  pdb
hd-address
An extensible HD Wallet Address management utility
Stars: ✭ 22 (-73.17%)
Mutual labels:  chain
plmc
Inference of couplings in proteins and RNAs from sequence variation
Stars: ✭ 85 (+3.66%)
Mutual labels:  protein-structure
pytorch-rgn
Recurrent Geometric Network in Pytorch
Stars: ✭ 28 (-65.85%)
Mutual labels:  protein-structure
DMPfold
De novo protein structure prediction using iteratively predicted structural constraints
Stars: ✭ 52 (-36.59%)
Mutual labels:  protein-structure
Vimpdb
Pdb and Vim integration
Stars: ✭ 188 (+129.27%)
Mutual labels:  pdb
Bio3DView.jl
A Julia package to view macromolecular structures in the REPL, in a Jupyter notebook/JupyterLab or in Pluto
Stars: ✭ 30 (-63.41%)
Mutual labels:  protein-structure
Pdb Cheatsheet
A cheatsheet for the Python Debugger (pdb)
Stars: ✭ 171 (+108.54%)
Mutual labels:  pdb
mmtf
The specification of the MMTF format for biological structures
Stars: ✭ 40 (-51.22%)
Mutual labels:  protein-structure
MLChainDemo
链式文件生成器原理分析(一)
Stars: ✭ 18 (-78.05%)
Mutual labels:  chain
Pdb
A parser for Microsoft PDB (Program Database) debugging information
Stars: ✭ 156 (+90.24%)
Mutual labels:  pdb
Pdbr
pdb + Rich library
Stars: ✭ 96 (+17.07%)
Mutual labels:  pdb
Pytest Pudb
Pytest PuDB debugger integration
Stars: ✭ 45 (-45.12%)
Mutual labels:  pdb
nopdb
NoPdb: Non-interactive Python Debugger
Stars: ✭ 67 (-18.29%)
Mutual labels:  pdb
mmtf-spark
Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
Stars: ✭ 20 (-75.61%)
Mutual labels:  protein-structure
Ihm Dictionary
📖 mmCIF support for hybrid/integrative models
Stars: ✭ 12 (-85.37%)
Mutual labels:  pdb
SQLCallStackResolver
Utility to resolve SQL Server callstacks to their correct symbolic form using just PDBs and without a dump file
Stars: ✭ 55 (-32.93%)
Mutual labels:  pdb
blockchain-in-node
This is an afternoon-project, a blockchain built in node, supporting PoW.
Stars: ✭ 20 (-75.61%)
Mutual labels:  chain
symreader-converter
Converts between Windows PDB and Portable PDB formats.
Stars: ✭ 50 (-39.02%)
Mutual labels:  pdb
Blink
A tool which allows you to edit source code of any MSVC C++ project live at runtime
Stars: ✭ 808 (+885.37%)
Mutual labels:  pdb
bioSyntax-archive
Syntax highlighting for computational biology
Stars: ✭ 16 (-80.49%)
Mutual labels:  pdb
woodpecker
woodpecker http client for Android
Stars: ✭ 17 (-79.27%)
Mutual labels:  chain
Uni-Fold
An open-source platform for developing protein models beyond AlphaFold.
Stars: ✭ 227 (+176.83%)
Mutual labels:  protein-structure
lightflow
A tiny Promise-inspired control flow library for browser and Node.js.
Stars: ✭ 29 (-64.63%)
Mutual labels:  chain
Ducible
A tool to make Windows builds reproducible.
Stars: ✭ 211 (+157.32%)
Mutual labels:  pdb
tape-neurips2019
Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology. (DEPRECATED)
Stars: ✭ 117 (+42.68%)
Mutual labels:  protein-structure
Python Remote Pdb
Remote vanilla PDB (over TCP sockets).
Stars: ✭ 186 (+126.83%)
Mutual labels:  pdb
django-querysetsequence
Chain multiple (disparate) QuerySets in Django
Stars: ✭ 92 (+12.2%)
Mutual labels:  chain
Pdbripper
PDBRipper is a utility for extract an information from PDB-files.
Stars: ✭ 173 (+110.98%)
Mutual labels:  pdb
enspara
Modeling molecular ensembles with scalable data structures and parallel computing
Stars: ✭ 28 (-65.85%)
Mutual labels:  protein-structure
Ilspy
.NET Decompiler with support for PDB generation, ReadyToRun, Metadata (&more) - cross-platform!
Stars: ✭ 14,011 (+16986.59%)
Mutual labels:  pdb
dssp
Application to assign secondary structure to proteins
Stars: ✭ 56 (-31.71%)
Mutual labels:  pdb
Biosyntax
Syntax highlighting for computational biology
Stars: ✭ 164 (+100%)
Mutual labels:  pdb
sidechainnet
An all-atom protein structure dataset for machine learning.
Stars: ✭ 227 (+176.83%)
Mutual labels:  protein-structure
Pypdb
A Python API for the RCSB Protein Data Bank (PDB)
Stars: ✭ 139 (+69.51%)
Mutual labels:  pdb
DoubleStar
A personalized/enhanced re-creation of the Darkhotel "Double Star" APT exploit chain with a focus on Windows 8.1 and mixed with some of my own techniques
Stars: ✭ 140 (+70.73%)
Mutual labels:  chain
Mcmd
Monte Carlo and Molecular Dynamics Simulation Package
Stars: ✭ 52 (-36.59%)
Mutual labels:  pdb
Jupyter Dock
Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.
Stars: ✭ 179 (+118.29%)
Mutual labels:  protein-structure
10 Simple Hacks To Speed Up Your Data Analysis In Python
Some useful Tips and Tricks to speed up the data analysis process in Python.
Stars: ✭ 45 (-45.12%)
Mutual labels:  pdb
DbgSymGrabber
Just another tool to download specify Symbol (.pdb) files
Stars: ✭ 35 (-57.32%)
Mutual labels:  pdb
Gtools
gevent tools
Stars: ✭ 7 (-91.46%)
Mutual labels:  pdb
pdb-tools
A dependency-free cross-platform swiss army knife for PDB files.
Stars: ✭ 240 (+192.68%)
Mutual labels:  pdb
IterTools.jl
Common functional iterator patterns
Stars: ✭ 124 (+51.22%)
Mutual labels:  chain
Pdb Tutorial
A simple tutorial about effectively using pdb
Stars: ✭ 720 (+778.05%)
Mutual labels:  pdb
Pdbpp
pdb++, a drop-in replacement for pdb (the Python debugger)
Stars: ✭ 693 (+745.12%)
Mutual labels:  pdb
Reclassex
ReClassEx
Stars: ✭ 542 (+560.98%)
Mutual labels:  pdb
PancakeTokenSniper
BSC BNB Pancake token sniper, buy, take profit and rug check
Stars: ✭ 184 (+124.39%)
Mutual labels:  chain
object shadow
The Shadow of a Ruby Object lets you See and Manipulate its Instance Variables and Methods
Stars: ✭ 26 (-68.29%)
Mutual labels:  chain
cTPnet
cTPnet Package
Stars: ✭ 18 (-78.05%)
Mutual labels:  protein-prediction
pdbfetch
Fetch PDB symbols directly from Microsoft's symbol servers
Stars: ✭ 33 (-59.76%)
Mutual labels:  pdb
1-60 of 119 similar projects