BitsofbytesCode and projects from my blog posts.
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MedicalzoopytorchA pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
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Fo DicomFellow Oak DICOM for .NET, .NET Core, Universal Windows, Android, iOS, Mono and Unity
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RivuletpyRobust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.
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Xcactionbar"Alfred for Xcode" plugin
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nnDetectionnnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without manual intervention. It includes guides for 12 data sets that were used to develop and evaluate the performance of the proposed method.
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All About The GanAll About the GANs(Generative Adversarial Networks) - Summarized lists for GAN
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Bcdu NetBCDU-Net : Medical Image Segmentation
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MedpyMedical image processing in Python
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ItkexamplesCookbook examples for the Insight Toolkit documented with Sphinx
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ModelsDLTK Model Zoo
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BiswebThis is the repository for the BioImage Suite Web Project
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Gleanhotfix for go applications via plugin, supports Linux and MacOS
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SodAn Embedded Computer Vision & Machine Learning Library (CPU Optimized & IoT Capable)
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ImageprocessingMicaSense RedEdge and Altum image processing tutorials
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Awesome Medical ImagingAwesome list of software that I use to do research in medical imaging.
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Image JsImage processing and manipulation in JavaScript
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ItkInsight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.
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GansegFramework for medical image segmentation using deep neural networks
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X Ray ClassificationX-ray Images (Chest images) analysis and anomaly detection using Transfer learning with inception v2
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Retina FeaturesProject for segmentation of blood vessels, microaneurysm and hardexudates in fundus images.
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Niftynet[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy
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Vnet TensorflowTensorflow implementation of the V-Net architecture for medical imaging segmentation.
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MiscnnA framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
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Imantics📷 Reactive python package for managing, creating and visualizing different deep-learning image annotation formats
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Node AudioGraph-based audio api for Node.js based on LabSound and JUCE
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Filepond🌊 A flexible and fun JavaScript file upload library
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Medical Datasetstracking medical datasets, with a focus on medical imaging
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TorchioMedical image preprocessing and augmentation toolkit for deep learning
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MousemorphTools for MRI mouse brain morphometry
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MedicaldetectiontoolkitThe Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.
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Interfacetable v3tinterfacetable_v3t (formerly check_interface_table_v3t)
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Fresco ProcessorsAn Android image processor library providing a variety of image transformations for Fresco.
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VimnavigationVim style keyboard navigation.
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Deeplabv3 PlusTensorflow 2.3.0 implementation of DeepLabV3-Plus
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Wh covid19 appVolunteer developed app containing information for frontline medical staff around COVID-19
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Openiterm2Opening iTerm2 in the current directory.
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PlaypixelsSwift Playground Book for learning image processing.
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Sanic DispatcherA Dispatcher extension for Sanic which also acts as a Sanic-to-WSGI adapter
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Iplug2C++ Audio Plug-in Framework for desktop, mobile and web [PRE-RELEASE]
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Lein Fore ProbA leiningen plugin to make a local copy of a problem from 4clojure
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BootstrapOpen Source JS plugins
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Animeavataarcreating Anime Avataar from a facial image
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Mpv Reloadmpv plugin for automatic reloading of slow/stuck video streams
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KittisegA Kitti Road Segmentation model implemented in tensorflow.
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QpmxA frontend for qpm, to provide source and build caching
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Smartcircle✂️Automatically determine where to crop a circular image out of a rectangular.
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St CganDataset and Code for our CVPR'18 paper ST-CGAN: "Stacked Conditional Generative Adversarial Networks for Jointly Learning Shadow Detection and Shadow Removal"
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