458 Open source projects that are alternatives of or similar to sequencework

Bystro genetic analysis (annotation, filtering, statistics)

A fast 23andMe genome text file parser, now superseded by arv

Python and C++ code for reading and writing genomics data.

Data intensive science for everyone.

Official git repository for Biopython (originally converted from CVS)

tools for working with genome variation graphs

minimalistic nucleic acid folding

Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences

A curated list of awesome bioinformatics software.

Ultrafast sequence typing and gene detection from NGS raw reads

[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia

Analysis pipelines for sequencing data

Official code repository for GATK versions 4 and up

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Numerical Encoding for Human Genetic Variants

A collection of scripts and notes related to genomics and bioinformatics

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

A package for designing activity-informed nucleic acid diagnostics for viruses.

A package for designing compact and comprehensive capture probe sets.

waka waka

Precision HLA typing from next-generation sequencing data

Efficient pythonic random access to fasta subsequences

A Java API for high-throughput sequencing data (HTS) formats.

Find target sites for the miRNAs in genomic sequences

🌈 A Curated List of Checklists ✔︎✔︎

A suite of tools to explore protein structures with Protein Blocks 🐍

🌩️ A list of awesome online development environments

Awesome community-created resources for extending Adobe XD

Seven Bridges Genomics aligner/caller debugging and analysis tools

🔫 Bullets.vim is a Vim/NeoVim plugin for automated bullet lists.

A tool for fast and accurate summarizing of variant calling format (VCF) files

🎮 The only Front-End Performance Checklist that runs faster than the others

A curated list of free and open source software and hardware to build and control a robot vacuum.

🎮 더 빠르게 작동하는 프론트엔드 성능 체크리스트

Stop relying on GUI; CLI **ROCKS**

Paratope Prediction using Deep Learning

Highly performant data storage in C++ for importing, querying and transforming variant data with C/C++/Java/Spark bindings. Used in gatk4.

xHLA: Fast and accurate HLA typing from short read sequence data

List of articles related to deep learning applied to music

A curated list of software and architecture related design patterns.

A curated list of materials to prepare for the GRE.

Карта развития веб-разработчика

Problem solving and idea generation tools

UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets

RNArtist allows you to design and paint your RNA 2D structures interactively. Coupled with the 3D viewer UCSF Chimera, use your 2D as a map to explore RNA 3D architectures.

A curated list of free, high-quality, university-level courses with video lectures related to the field of Computer Vision.

Lightweight, feature-rich, accessible front-end library

A WGS de novo assembler based on the FMD-index for large genomes

Google Apps Script snippets

🏆 Discover best-of lists with awesome open-source projects on all kinds of topics.

An easy-to-use way for running Galaxy workflows.

Genomics Workflows on AWS

Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.

Recurrent Geometric Network in Pytorch

Process lists easily

Self Sovereign Identity Curated

⟠ A curated list of awesome Solidity resources, libraries, tools and more

Here, CLI tools, libraries, Add-ons, Reports, Benchmarks and Sample Scripts for taking advantage of Google Apps Script which are publishing in my blog, Gists and GitHub are summarized.

A Framework for Coalescent Simulation in R

A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform