128 Open source projects that are alternatives of or similar to setup-sam

AWS SAM build images

This project is an example about lambda, SAM, dynamodb. This repository contains source code and supporting files for a serverless application that you can deploy with the SAM CLI. It includes the following files and folders.

pythonic wrapper for htslib

A boilerplate Go and AWS Lambda app. Demonstrates an expert configuration of 10+ AWS services to support running Go functions-as-a-service (FaaS).

A tool to backup and restore AWS Connect, with some useful other utilities too

Fast and accurate sequence demultiplexing

Compressor for genomic files (FASTQ, SAM/BAM, VCF, FASTA, GVF, 23andMe...), up to 5x better than gzip and faster too

QP real-time embedded frameworks/RTOS for Arduino (AVR and SAM)

A DNA Sequence Alignment/Map (SAM) library for Clojure

♾️ CML - Continuous Machine Learning | CI/CD for ML

Run Node.js web applications and APIs using existing application frameworks on AWS #serverless technologies such as Lambda, API Gateway, Lambda@Edge, and ALB.

Declarative continuous deployment for Kubernetes.

A lightweight middleware framework for functions as a service

Airline Booking is a sample web application that provides Flight Search, Flight Payment, Flight Booking and Loyalty points including end-to-end testing, GraphQL and CI/CD. This web application was the theme of Build on Serverless Season 2 on AWS Twitch running from April 24th until end of August in 2019.

A PyTorch implementation of Sharpness-Aware Minimization for Efficiently Improving Generalization

Deployment template for a continuous training pipeline.

Frequently used commands in bioinformatics

Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome

A stand-alone implementation of the Acme text editor's command language.

iOS UI SDK for Karhoo

General Purpose Input/Output (GPIO) library for Arduino

C library for high-throughput sequencing data formats

Automatically deploy your project to GitHub Pages using GitHub Actions. This action can be configured to push your production-ready code into any branch you'd like.

A Java API for high-throughput sequencing data (HTS) formats.

StackStorm (aka "IFTTT for Ops") is event-driven automation for auto-remediation, security responses, troubleshooting, deployments, and more. Includes rules engine, workflow, 160 integration packs with 6000+ actions (see https://exchange.stackstorm.org) and ChatOps. Installer at https://docs.stackstorm.com/install/index.html. Questions? https://…

Welcome to the Innovator Island serverless workshop! This repo contains all the instructions and code you need to complete the workshop. Questions? Contact @jbesw.

Jenkins X provides automated CI+CD for Kubernetes with Preview Environments on Pull Requests using Cloud Native pipelines from Tekton

A simple/sample AngularV4-based web app that demonstrates different API authentication options using Amazon Cognito and API Gateway with an AWS Lambda and Amazon DynamoDB backend that stores user details in a complete end to end Serverless fashion.

This repo contains all the SAM templates created in the Twitch series #SessionsWithSAM. The show is every Thursday on Twitch at 10 AM PDT.

A D library for computational biology and bioinformatics

Vilicus is an open source tool that orchestrates security scans of container images(docker/oci) and centralizes all results into a database for further analysis and metrics.

SAM: Software Automatic Mouth (Ported from https://github.com/vidarh/SAM)

Learning the Sequence Alignment/Map format

Simple pure Python SAM parser and objects for working with SAM records

A template for an AWS SAM project with continuous integration.

AWS Serverless Application Model (SAM) is an open-source framework for building serverless applications

pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)

Syntax highlighting for computational biology

Hands-On Serverless Applications with Go, published by Packt.

Directory Services Internals (DSInternals) PowerShell Module and Framework

My bioinfo toolbox

This repository provides a general DevOps practices such MSA, IaC, CICD and Monitoring. AWS various services are used to provide DevOps best practices.

A Visual Effects pipeline to manage jobs, shots and software assignment, with a simple asset manager. Its extensively integrated with CortexVFX and Gaffer. (and it builds booth, with support for Maya, Houdini and Nuke, if you have then installed!)

CLI tool to build, test, debug, and deploy Serverless applications using AWS SAM

Jenkins automation server

The free embedded operating system.

📗🌐 🚢 Comprehensive and exhaustive JavaScript & Node.js testing best practices (August 2021)

AWS Toolkit for JetBrains - a plugin for interacting with AWS from JetBrains IDEs

开源运维平台：面向中小型企业设计的轻量级无Agent的自动化运维平台，整合了主机管理、主机批量执行、主机在线终端、文件在线上传下载、应用发布部署、在线任务计划、配置中心、监控、报警等一系列功能。

Kraken CI is a continuous integration and testing system.

MicroK8s is a small, fast, single-package Kubernetes for developers, IoT and edge.

Tools for working with SAM/BAM data

Modern UI for Ansible

Speech synthesis for ESP8266 using S.A.M. port

SAM: Sharpness-Aware Minimization (PyTorch)

MCW OSS PaaS and DevOps

Simple FASTQ quality assessment using Python

Terraform module that creates an S3 bucket with an optional IAM user for external CI/CD systems

A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.

A graphical text editor