398 Open source projects that are alternatives of or similar to variantkey

Python-based UCSC genome browser snapshot-taker and gallery-maker

Understand DNA structure and how machine learning can be used to work with DNA sequence data.

Highly performant data storage in C++ for importing, querying and transforming variant data with C/C++/Java/Spark bindings. Used in gatk4.

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.

Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

Examples to get started with IBM Functional Genomics Platform

Bootstrap Modal for iOS

Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.

Capacitated Vehicle Routing Problem

A low-level toolkit to create floating elements. Tooltips, popovers, dropdowns, and more

Finds SNP sites from a multi-FASTA alignment file

simplified searching, fetching, and parsing records from NCBI using their E-utilities interface

Saikai - (Resume in Japanese) is a web platform for management resume submissions. Developer web: https://saikai-develop.web.app/ ****** LIVE WEBSITE: https://saikai.me

CUT&RUN and CUT&Tag data processing and analysis

🚀 Handy dynamic styles utilities for React Native and React Native Web.

A phenotype-based tool for variant prioritization in WES and WGS data

Genome Annotation Without Nightmares

🛠 React Component Developer Kit

Phage-Host Interaction Search Tool

Transcripts annotation and GO enrichment Fisher tests

High-performance error correction for Illumina resequencing data

Introduction to the Command Line for Genomics

Easy genetic ancestry predictions in Python

Improve the quality of a denovo assembly by scaffolding and gap filling

Python package and CLI for whole-genome duplication related analyses

Base is Baianat's design language, built based on the art of big typography and giving exactly the same experience on any device using responsive elements technique.

Generate input parameters and coordinates for atomistic and coarse-grained simulations of polymers, ssDNA, and carbohydrates

Backend Server for CIViC Project

A scalable styled-component theming system that fully leverages JavaScript as a language for styles authoring and theming at both local and global levels.

TAD calling, phase imputation, 3D modeling and more for diploid single-cell Hi-C (Dip-C) and general Hi-C

Automate emergency position closing and autotrading termination using a multi-setting expert advisor.

📊Evaluating, filtering, comparing, and visualising VCF

Find target sites for the miRNAs in genomic sequences

Explore rearrangements and copy-number amplifications in a cancer genome

Rare variant test software for next generation sequencing data

DISCOVER co-occurrence and mutual exclusivity analysis for cancer genomics data

Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.

Bioconductor package for management of multi-assay data

A Framework for Coalescent Simulation in R

ntHash implementation in Rust

🍊 💫 Trim, circularise and orient long read bacterial genome assemblies

Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.).

No description or website provided.

A bioinformatics API and web-app to integrate multi-omics datasets & interface with public databases.

Seven Bridges Genomics aligner/caller debugging and analysis tools

Password Generator using Genetic Algorithm

A WGS de novo assembler based on the FMD-index for large genomes

Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products

WebAssembly modules for genomics

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

VariantRetriever is a minimalist package for feature flagging

A fast 23andMe DNA parser and inferrer for Python

A selection of configurable native DOM UI elements

waka waka

A Snakemake workflow to process single samples or cohorts of paired-end sequencing data (WGS or WES) using trim galore/bwa/GATK4/parabricks.

This app is for animating a car like uber from one position to another with preserving angle and smooth animation

phenol: Phenotype ontology library

Koi Farm, a koi breeding game

Reference genome resource manager