14 open source projects by Ensembl

Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

Language agnostic RESTful data access to Ensembl data over HTTP

Plugins for the Ensembl Variant Effect Predictor (VEP)

*DEPRECATED* Job management for the Ensembl Genebuild pipeline

EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource

Ensembl's Automated QC Framework

File parsing and writing code for Ensembl

The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

Ensembl Funcgen Perl API and SQL schema

TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)

The Ensembl Compara Perl API and SQL schema

Linking GWAS studies to genes through cis-regulatory datasets

Ensembl beta client

The code to run an Ensembl website