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Top 2 species-trees open source projects
treebest
TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)
✭ 15
c
C++
perl
reconciliation
ensembl
neighbor-joining
maximum-likelihood
phylogeny
species-trees
gene-trees
get phylomarkers
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using coalescent and concatenation approaches
✭ 34
perl
c
shell
Roff
Makefile
HTML
pipeline
genomics
phylogenetic-trees
phylogenetics
markers
orthologues
microbiology
population-genetics
codon-alignment
maximum-likelihood
phylogenomics
species-trees
recombination
core-genome
species-delimitation
phylogenomics-pipeline
clock-hypothesis
1-2
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2
species-trees projects