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15 open source projects by YuLab-SMU

[ Open user page on Github ]
1. Treedata Book
📚 a complete reference book for treeio, tidytree and ggtree packages
✭ 67
htmlvisualization
2. Ggmsa
🚥 Visualizing pubication-quality multiple sequence alignment using ggplot2
✭ 47
r
3. Ggtree
🎄Visualization and annotation of phylogenetic trees
✭ 501
rvisualizationannotationsggplot2
4. Clusterprofiler
📊 statistical analysis and visualization of functional profiles for genes and gene clusters
✭ 460
gorvisualizationrstats
5. ggtreeExtra
🍋 Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
✭ 68
rMakefile
6. MicrobiotaProcess
No description, website, or topics provided.
✭ 65
rMakefile
7. tidytree
🚿A Tidy Tool for Phylogenetic Tree Data Manipulation
✭ 34
rMakefilecrantidyversetree-dataphylogenetic-tree
8. enrichplot
Visualization of Functional Enrichment Result
✭ 142
rMakefilevisualizationpathway-analysisenrichment-analysis
9. docs
No description, website, or topics provided.
✭ 14
10. treeio
🌱 Base Classes and Functions for Phylogenetic Tree Input and Output
✭ 70
rMakefileparserexporterphylogenetic-trees
11. DOSE
😷 Disease Ontology Semantic and Enrichment analysis
✭ 86
rMakefilesemantic-similaritydisease-ontologyenrichment-analysis
12. ReactomePA
Reactome Pathway Analysis
✭ 27
rMakefileenrichment-analysisreactome-pathway-analysisreactomepa
13. plotting-tree-with-data-using-ggtreeExtra
doi.org/10.1093/molbev/msab166
✭ 23
TeXrMakefile
14. aplot
decorate a plot with associated information
✭ 67
rMakefile
15. MicrobiomeProfiler
A shiny package for microbiome functional enrichment analysis
✭ 23
rTeXMakefileCSS
1-15 of 15 user projects