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Top 10 phylogenetic-trees open source projects
archaeopteryx-js
Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.
✭ 27
javascript
HTML
visualization
analysis
evolution
phylogenetic-trees
phylogenetics
archaeopteryx
archaeopteryx-js
PhyloTrees.jl
Phylogenetic trees in Julia
✭ 15
julia
bioinformatics
phylogenetic-trees
phylogenetics
revolver
REVOLVER - Repeated Evolution in Cancer
✭ 52
r
CSS
javascript
clustering
phylogenetic-trees
cancer-genomics
transfer-learning
cancer-evolution
genesis
A library for working with phylogenetic and population genetic data.
✭ 43
C++
CMake
python
phylogenetic-trees
phylogenetics
population-genetics
evolutionary-placement
phylogenetic-data
placement
pool-sequencing
phylogenetic-placements
graphlan
High-quality circular representations of taxonomic and phylogenetic trees
✭ 45
python
tools
phylogenetic-trees
biobakery
taxonomic-trees
circular-visualization
get phylomarkers
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using coalescent and concatenation approaches
✭ 34
perl
c
shell
Roff
Makefile
HTML
pipeline
genomics
phylogenetic-trees
phylogenetics
markers
orthologues
microbiology
population-genetics
codon-alignment
maximum-likelihood
phylogenomics
species-trees
recombination
core-genome
species-delimitation
phylogenomics-pipeline
clock-hypothesis
treeio
🌱 Base Classes and Functions for Phylogenetic Tree Input and Output
✭ 70
r
Makefile
parser
exporter
phylogenetic-trees
biodiverse
A tool for the spatial analysis of diversity
✭ 63
perl
phylogenetic-trees
spatial-analysis
phylogeography
phylogenetic-diversity
phylodiversity
endemism
beta-diversity
species-turnover
randomisations
hacktoberfest
biodiverse
phyd3
Phylogenetic tree viewer based on D3.js
✭ 47
javascript
PHP
HTML
CSS
typescript
visualization
phylogenetic-trees
d3js
pyCircos
python Circos
✭ 233
python
visualization
phylogenetic-trees
biopython
matplotlib
circos
circos-plot
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10
phylogenetic-trees projects