6 open source projects by pinellolab

STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data

SIMBA: SIngle-cell eMBedding Along with features

Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

GRAph-based Finding of Individual Motif Occurrences

Benchmarking computational single cell ATAC-seq methods

Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline