Top 6 epigenetics open source projects

Modelling DNA methylation profiles

mgatk: mitochondrial genome analysis toolkit

Cell type specific enrichments using finemapped variants and quantitative epigenetic data

Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline

Bead-based single-cell atac processing

Detecting methylation using signal-level features from Nanopore sequencing reads