All Git Users → quinlan-lab

6 open source projects by quinlan-lab

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create a gemini-compatible database from a VCF

✭ 51

pythonic wrapper for htslib

✭ 18

python c shell bioinformatics genomics sam bam htslib

BED QC tool (in the making)

✭ 14

pathoscore evaluates variant pathogenicity tools and scores.

✭ 21

python shell HTML variants score vcfanno pathogenic-variants

Detect novel (and reference) STR expansions from short-read data

✭ 42

nim python groovy str hacktoberfest whole-genome-sequencing nim-lang short-tandem-repeats

A small repo for storing the code for making the files and html for CCRs.

✭ 22

HTML shell python

1-6 of 6 user projects