8 open source projects by slowkow

Tools and databases for analyzing HLA and VDJ genes.

📍 Repel overlapping text labels away from each other.

📊 Identify cell types and pathways affected by genetic risk loci.

🚦 Run Picard on BAM files and collate 90 metrics into one file.

🐛 How to use CENTIPEDE to determine if a transcription factor is bound.

🎯 Human transcription factor target genes.

🐍 Snakefiles for common RNA-seq data analysis workflows.

Read HOMER motif analysis output in R.