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Top 3 batch-correction open source projects

Reference mapping for single-cell genomics

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Jupyter Notebook python deep-learning scrna-seq data-integration single-cell rna-seq-analysis single-cell-genomics batch-correction multimodal-deep-learning multiomics human-cell-atlas

DigitalCellSorter

Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:

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python Batchfile visualization quality-control gene clustering identification transcriptomics anomaly-detection batch-correction single-cell-sequencing-analysis automatic-cell-identification cancer-heterogeneity

Harmony framework for connecting scRNA-seq data from discrete time points

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Jupyter Notebook python scrna-seq mnn batch-correction scrna-seq-analysis developmental-trajecotries

1-3 of 3 batch-correction projects