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Top 3 multiomics open source projects

Reference mapping for single-cell genomics

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Jupyter Notebook python deep-learning scrna-seq data-integration single-cell rna-seq-analysis single-cell-genomics batch-correction multimodal-deep-learning multiomics human-cell-atlas

scarf

Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.

proteomics-metadata-standard

The Proteomics Experimental Design file format: Standard for experimental design annotation

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python perl metadata proteomics proteomics-datasets multiomics proteomexchange sdrf pride-metadata msrun-metadata sdrf-proteomics proteomics-community proteomics-experiments mage-tab

1-3 of 3 multiomics projects