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Top 5 human-cell-atlas open source projects
scarches
Reference mapping for single-cell genomics
✭ 175
Jupyter Notebook
python
deep-learning
scrna-seq
data-integration
single-cell
rna-seq-analysis
single-cell-genomics
batch-correction
multimodal-deep-learning
multiomics
human-cell-atlas
D3E
Discrete Distributional Differential Expression
✭ 19
python
differential-expression
single-cell-rna-seq
human-cell-atlas
single cell portal
Tutorials, workflows, and convenience scripts for Single Cell Portal
✭ 41
HTML
python
wdl
r
Jupyter Notebook
Dockerfile
rna-seq-analysis
single-cell-genomics
human-cell-atlas
EmptyDrops2017
Code for the empty droplet and cell detection project from the HCA Hackathon.
✭ 16
TeX
r
simulations
manuscript
single-cell-rna-seq
human-cell-atlas
scAlign
A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batches
✭ 32
r
scrna-seq
single-cell
single-cell-genomics
scrna-seq-analysis
human-cell-atlas
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