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Top 4 fusion-genes open source projects

squid

SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data

✭ 37

C++python rna-seq structural-variation fusion-genes non-fusion-genes

rnafusion

RNA-seq analysis pipeline for detection gene-fusions

✭ 72

Nextflow groovy python Dockerfile HTML workflow rna-seq pipeline gene-fusion fusion rna fusion-genes nf-core

fusion-report

Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.github.io/fusion-report/example/

✭ 19

python HTML javascript CSS Dockerfile visualization report fusion-genes

arriba

Fast and accurate gene fusion detection from RNA-Seq data

✭ 162

C++r shell rna-seq cancer gene-fusion star variant-calling virus-integration structural-variation fusion-genes gene-fusions fusion-gene

1-4 of 4 fusion-genes projects