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Top 6 phenotypes open source projects

API for linked biological knowledge

✭ 54

python Gherkin perl shell Makefile Dockerfile api bioinformatics gene swagger ontologies phenotypes model-organisms

Learn interpretable computational phenotyping models from k-merized genomic data

✭ 47

python C++CMake machine-learning genomics k-mer phenotypes biomarker-discovery

HPO-translations

Internationalisation of the HPO content

✭ 19

translation semantic-web ontology phenotyping phenotypes hpo hpo-translations phenomics phenotype-ontologies obofoundry

A phenotype-based tool for variant prioritization in WES and WGS data

✭ 31

java python groovy variants disease phenotypes variant-annotations variant-analysis omim vcf-files translationalscience prioritize-disease-variants rare-variants synthetic-genomes

phenol: Phenotype ontology library

✭ 15

java genomics ontologies phenotypes monarchinitiative phenomics human-phenotype-ontology mammalian-phenotype-ontology

An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/

✭ 100

Jupyter Notebook python CSS C++C#shell nlp docker natural-language-processing mongodb solr luigi phenotype phenotypes clinical-research clinical-quality-language nlpql clinical-phenotyping

1-6 of 6 phenotypes projects