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Top 3 phylogeography open source projects

Ancestor character reconstruction and visualisation for rooted phylogenetic trees

✭ 15

python javascript HTML visualisation phylogenetics phylogeography maximum-likelihood parsimony ancestral-character-reconstruction

SPREAD

Spread visualizes how viruses and other pathogens are spreading in time and space. It creates compellable shareable, interactive and time-animated visualization.

✭ 9

clojure java CSS shell HTML Dockerfile graphql data-science data-visualization viruses phylogeography graph-visualisation spread covid-19 covid covid19 sars-covid-2

biodiverse

A tool for the spatial analysis of diversity

✭ 63

perl phylogenetic-trees spatial-analysis phylogeography phylogenetic-diversity phylodiversity endemism beta-diversity species-turnover randomisations hacktoberfest biodiverse

1-3 of 3 phylogeography projects