Top 47 evolution open source projects

Evolution simulator

Helping humanity evolve

Curated (meta)list of resources for Biology.

public repository for the "architecture improvement method reference"

Bayesian Evolutionary Analysis by Sampling Trees

An interesting display of evolution through neural networks and a genetic algorithm

Backend is responsible to provide data to EVOlution App - iOS

Bayesian Evolutionary Analysis Sampling Trees

Evolutionary Algorithms Framework

Solve multi-objective optimization problems with distributed evolutionary algorithms

Guided synteny alignment between duplicated genomes (within specified quota constraint)

Trait-Driven Models of Ecology and Evolution 🌲

Simulating complete lives of different cellular animals and plants. Evolution, inheritance, predation and more.

The main repository for the development of the evolution game Thrive.

A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)

Space invaders, but the invaders evolve with genetic algorithm

Continuous Unix commit history from 1970 until today

An interactive ecosystem and evolution simulator written in C and OpenGL, for GNU/Linux.

Evolving version of Conway’s Game of Life.

SharpNEAT - Evolution of Neural Networks. A C# .NET Framework.

Code and data to create a git repository representing the Unix source code history

Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.

DISHTINY: A Platform for Studying Open-Ended Evolutionary Transitions in Individuality

Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.

Tiny Genetic Programming in Python

Command-line program to wrap dagchainer and combine pairwise results into multi-alignments in column format

Simulation of life & evolution

Manuscript for functional prediction of transcriptomic “dark matter” across species

Cutting Edge UI Components for Modern Developers

Редактируемая статья для блога: систематизация информации по симуляции эволюции

PhyML -- Phylogenetic estimation using (Maximum) Likelihood

Write DB migrations with SQL and run them with a CLI

A public python implementation of the DeepHyperNEAT system for evolving neural networks. Developed by Felix Sosa and Kenneth Stanley. See paper here: https://eplex.cs.ucf.edu/papers/sosa_ugrad_report18.pdf

Visualize the evolution of a file tracked by git

Citylines.co is a collaborative platform for mapping the transit systems of the world!

Evolution Simulation in XNA Refresh

Supported highly optimized and flexible genetic algorithm package for python

Tracking and proposing changes to SDL's public APIs.

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

EXONA: The Evolutionary eXploration of Neural Networks Framework -- EXACT, EXALT and EXAMM

De novo annotation of young retrotransposons

Data visualization tool for wikis evolution

Pinpoints the mutation favored by selection

Python package and CLI for whole-genome duplication related analyses

FAVITES (FrAmework for VIral Transmission and Evolution Simulation)

Configuration tutorials for a variety of mail user agents.

A Framework for Coalescent Simulation in R