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Top 2 phate open source projects

ReductionWrappers

R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)

✭ 31

r wrapper bioinformatics dimensionality-reduction tsne forceatlas2 umap dimension-reduction force-directed-graphs wrappers seurat singlecellexperiment singlecellexperiment-objects paga phate opentsne pacmap dimensional-reduction

scGEAToolbox: Matlab toolbox for single-cell gene expression analyses

✭ 15

HTML matlab workflow scrna-seq analyses rna-seq-analysis tsne matlab-toolbox trajectory dimensionality phate demo-scripts

1-2 of 2 phate projects