406 Open source projects that are alternatives of or similar to awesome-phages

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GNparser normalises scientific names and extracts their semantic elements.

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R mased batch sequence downloader, with primer development and in silico evaluation capabilities

Remote protein homology detection suite.

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Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

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viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data

code for reading and processing Allen Institute for Brain Science data

Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G protein-coupled receptors (GPCRs).

A powerful open source data warehouse system

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Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

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GenomeTools genome analysis system.

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Protein Graph Library

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A faster lmm for GWAS. Supports GPU backend.

Ten Quick Tips for Deep Learning in Biology

cython + htslib == fast VCF and BCF processing

dysgu-SV is a collection of tools for calling structural variants using short or long reads

The BridgeDb Library source code

A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment

A simple command-line tool to download data from Joint Genome Institute databases