175 Open source projects that are alternatives of or similar to Covidprognosis

Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans

Kaggle datascience bowl 2017

End-to-end one-class instance segmentation based on U-Net architecture for Data Science Bowl 2018 in Kaggle

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

Paper reading notes on Deep Learning and Machine Learning

Odil is a C++11 library for the DICOM standard

Fellow Oak DICOM for .NET, .NET Core, Universal Windows, Android, iOS, Mono and Unity

Awesome list of software that I use to do research in medical imaging.

A set of common support code for medical imaging, surgical navigation, and related purposes.

Cookbook examples for the Insight Toolkit documented with Sphinx

Keras implementation of the multi-channel cascaded architecture introduced in the paper "Brain Tumor Segmentation with Deep Neural Networks"

tracking medical datasets, with a focus on medical imaging

PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty

Framework for medical image segmentation using deep neural networks

A platform for end-to-end development of machine learning solutions in biomedical imaging

A medical imaging framework for Pytorch

DICOM Web Viewer: open source zero footprint medical image viewer.

All About the GANs(Generative Adversarial Networks) - Summarized lists for GAN

DLTK Model Zoo

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

Deep Learning tools for brain medical images

A framework for tools built on top of Cornerstone.

Starviewer, a cross-platform open source medical imaging software

The Medical Imaging Interaction Toolkit.

Segment Source Distribution

Repository for the article "Unsupervised domain adaptation for medical imaging segmentation with self-ensembling".

Chest Xray image analysis using Deep learning !

ADN: Artifact Disentanglement Network for Unsupervised Metal Artifact Reduction

Tensorflow implementation of paper: A Hierarchical Approach for Generating Descriptive Image Paragraphs

Deep Learning Papers on Medical Image Analysis

Tools for MRI mouse brain morphometry

Deep Learning for Automatic Pneumonia Detection, RSNA challenge

Multi-platform, free open source software for visualization and image computing.

MNE-CPP: A Framework for Electrophysiology

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

🏥 Visualizing Convolutional Networks for MRI-based Diagnosis of Alzheimer’s Disease

Medical image preprocessing and augmentation toolkit for deep learning

[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

⚡High Performance DICOM Medical Image Parser in Go.

Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models

Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening

JavaScript library to display interactive medical images including but not limited to DICOM

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

A list of Medical imaging datasets.

Wining solution and its improvement for MICCAI 2017 Robotic Instrument Segmentation Sub-Challenge

Tensorflow implementation of the V-Net architecture for medical imaging segmentation.

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

Classification for covid-19 chest X-ray images using Lightning

U-Net Brain Tumor Segmentation

OSS Implementation of DICOMweb standard

U-Net: Convolutional Networks for Biomedical Image Segmentation

Slicer extensions index

Weasis is a DICOM viewer available as a desktop application or as a web-based application.

X-ray Images (Chest images) analysis and anomaly detection using Transfer learning with inception v2

Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.

The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core libraries, and basic command-line tools. Extension packages are hosted by the MIRTK GitHub group at

The OHIF Medical Imaging Viewer is for viewing medical images. It can retrieve and load images from most sources and formats; render sets in 2D, 3D, and reconstructed representations; allows for the manipulation, annotation, and serialization of observations; supports internationalization, OpenID Connect, offline use, hotkeys, and many more features.

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

Deep Learning Toolkit for Medical Image Analysis

Website for NA-MIC Project Weeks