ProjectweekWebsite for NA-MIC Project Weeks
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Fo DicomFellow Oak DICOM for .NET, .NET Core, Universal Windows, Android, iOS, Mono and Unity
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SlicerMulti-platform, free open source software for visualization and image computing.
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ItkexamplesCookbook examples for the Insight Toolkit documented with Sphinx
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CtkA set of common support code for medical imaging, surgical navigation, and related purposes.
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OdilOdil is a C++11 library for the DICOM standard
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Medical Datasetstracking medical datasets, with a focus on medical imaging
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MedicaldetectiontoolkitThe Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.
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MedicaltorchA medical imaging framework for Pytorch
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DeepbrainDeep Learning tools for brain medical images
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All About The GanAll About the GANs(Generative Adversarial Networks) - Summarized lists for GAN
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Quicknat pytorchPyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty
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MedicalzoopytorchA pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
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Segment OpenSegment Source Distribution
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CornerstonetoolsA framework for tools built on top of Cornerstone.
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StarviewerStarviewer, a cross-platform open source medical imaging software
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MitkThe Medical Imaging Interaction Toolkit.
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Brain Tumor Segmentation KerasKeras implementation of the multi-channel cascaded architecture introduced in the paper "Brain Tumor Segmentation with Deep Neural Networks"
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Cascaded FcnSource code for the MICCAI 2016 Paper "Automatic Liver and Lesion Segmentation in CT Using Cascaded Fully Convolutional NeuralNetworks and 3D Conditional Random Fields"
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DwvDICOM Web Viewer: open source zero footprint medical image viewer.
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BIRLBIRL: Benchmark on Image Registration methods with Landmark validations
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GansegFramework for medical image segmentation using deep neural networks
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ItkInsight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.
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AE-CNNICVGIP' 18 Oral Paper - Classification of thoracic diseases on ChestX-Ray14 dataset
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TorchioMedical image preprocessing and augmentation toolkit for deep learning
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AdnADN: Artifact Disentanglement Network for Unsupervised Metal Artifact Reduction
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Dicom⚡High Performance DICOM Medical Image Parser in Go.
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Lightning Covid19Classification for covid-19 chest X-ray images using Lightning
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Breast cancer classifierDeep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening
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Vnet TensorflowTensorflow implementation of the V-Net architecture for medical imaging segmentation.
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PyradiomicsOpen-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics
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Robot Surgery SegmentationWining solution and its improvement for MICCAI 2017 Robotic Instrument Segmentation Sub-Challenge
Stars: ✭ 528 (-59.35%)
Kaggle RsnaDeep Learning for Automatic Pneumonia Detection, RSNA challenge
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DipyDIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
Stars: ✭ 417 (-67.9%)
RivuletpyRobust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.
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Niftynet[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy
Stars: ✭ 1,276 (-1.77%)
U NetU-Net: Convolutional Networks for Biomedical Image Segmentation
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DomainadaptationRepository for the article "Unsupervised domain adaptation for medical imaging segmentation with self-ensembling".
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WeasisWeasis is a DICOM viewer available as a desktop application or as a web-based application.
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Cnn Interpretability🏥 Visualizing Convolutional Networks for MRI-based Diagnosis of Alzheimer’s Disease
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XvisionChest Xray image analysis using Deep learning !
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Im2pTensorflow implementation of paper: A Hierarchical Approach for Generating Descriptive Image Paragraphs
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LungmaskAutomated lung segmentation in CT
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X Ray ClassificationX-ray Images (Chest images) analysis and anomaly detection using Transfer learning with inception v2
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Diabetic-Retinopathy-DetectionDIAGNOSIS OF DIABETIC RETINOPATHY FROM FUNDUS IMAGES USING SVM, KNN, and attention-based CNN models with GradCam score for interpretability,
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MousemorphTools for MRI mouse brain morphometry
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istnImage-and-Spatial Transformer Networks
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SlicergitsvnarchiveMulti-platform, free open source software for visualization and image computing.
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Grand Challenge.orgA platform for end-to-end development of machine learning solutions in biomedical imaging
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DltkDeep Learning Toolkit for Medical Image Analysis
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Data Science Bowl 2018End-to-end one-class instance segmentation based on U-Net architecture for Data Science Bowl 2018 in Kaggle
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DeepmedicEfficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans
Stars: ✭ 809 (-37.72%)