632 Open source projects that are alternatives of or similar to Flowcraft

For extensive instructor led learning

Prometheus spot instance exporter to monitor AWS instance termination with Hollowtrees

spacy-wordnet creates annotations that easily allow the use of wordnet and wordnet domains by using the nltk wordnet interface

An open-access bioinformatics text

Groovy pipeline jobs that build and test Container Linux with Jenkins

metaGraf is a opinionated specification for describing a software component and what its requirements are from the runtime environment. The mg command, turns metaGraf specifications into Kubernetes resources, supporting CI, CD and GitOps software delivery.

Code examples of fast and simple k-mer counters for tutorial purposes

Genetic Map Comparison

contains handy groovy workflow-libs scripts

Bystro genetic analysis (annotation, filtering, statistics)

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

Version 2.1.0 released

RADseq Data Exploration, Manipulation and Visualization using R

A tool to circularize genome assemblies

Shell supporting pipelines to and from multiple processes

Compute N50/NG50 and auN/auNG

Data Stream Processing API for GO

A build system for modular development in Salesforce, delivered as a sfdx plugin that can be implemented in any CI/CD system of choice

Elastic Crontab System 简单易用的分布式定时任务管理系统

A package for designing compact and comprehensive capture probe sets.

A simple longslit spectroscopy pipeline in Python

Complex structural variant detection from WGS data

A SingleCell RNASeq pre-processing snakemake workflow

Today I Learned

Displays CI statuses on a dashboard and triggers fun modules representing the status!

基于Spring Cloud的微服务业务框架

zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs

Generate beautiful documentation for your data pipelines in markdown format

[DEPRECATED] Simple, flexible, delightful web crawler/spider package

Fast hash function for DNA sequences

A Julia package for piping a value through a series of transformation expressions using a more convenient syntax than Julia's native piping functionality.

Bioinformatics pipeline for SARS-CoV-2 sequencing at CZ Biohub

NLP pipeline software using common workflow language

Tired of pushing to test your .gitlab-ci.yml?

Bayesian genotyper for structural variants

A React web application to query and share any PostgreSQL database.

Open solution to the Toxic Comment Classification Challenge

Data Wrangling and Processing for Genomics

Connect processes into powerful data pipelines with a simple git-like filesystem interface

Simple and flexible ML workflow engine

Modern WebGL state wrapper for PEX: allocate GPU resources (textures, buffers), setup state pipelines and passes, and combine them into commands.

Transformers Pipeline with KoELECTRA

PyTorch extensions for fast R&D prototyping and Kaggle farming

Swarm CI - Docker Swarm-based CI system or enhancement to existing systems.

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

A lightweight data processing framework for Apache Spark

Simple Automated CI/CD Pipeline for GitHub and GitLab Projects

FreeCAD - flamingo workbench

NGLess: NGS with less work

Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.

Curated set of transformers that make your work with steppy faster and more effective 🔭

Precision HLA typing from next-generation sequencing data

mito ETL tool

annotate a VCF with other VCFs/BEDs/tabixed files

A simple Spark-powered ETL framework that just works 🍺

[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia

Fast genome-wide functional annotation through orthology assignment

An n:m message multiplexer written in Go

Proof-of-concept seq-to-graph mapper and graph generator

Identify hardcoded secrets and dangerous behaviours