296 Open source projects that are alternatives of or similar to MRQy

Repository containing the code of one of the networks that we employed in the iSEG Grand MICCAI Challenge 2017, infant brain segmentation.

A collection of deep learning models with a unified API.

A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.

A medical image converter

Smart India Hackathon 2019 project given by the Department of Atomic Energy

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

Meta-repository of screening mammography classifiers

Programming assignments, labs and quizzes from all courses in the Coursera AI for Medicine Specialization offered by deeplearning.ai

Develop dose prediction models for knowledge-based planning in radiotherapy

Convolutional AutoEncoder application on MRI images

RESTful PACS server with plugins

Resurces for MRI images processing and deep learning in 3D

PyTorch Implementation of Small Lesion Segmentation in Brain MRIs with Subpixel Embedding (ORAL, MICCAIW 2021)

This package is no longer under active development. We recommend using Lighthouse CI. CLI tool for running Google’s Lighthouse checks

BIDScoin converts your source-level neuroimaging data to BIDS

User-oriented public repository of Gate (macros, examples and user contributions)

Brainy is a virtual MRI analyzer. Just upload the MRI scan file and get 3 different classes of tumors detected and segmented. In Beta.

Dermatology focused medical records software, augmented with computer vision and artificial intelligence [Meteor packaged with Electron]

2D Fourier Transform of Nuclear Magnetic Resonance Imaging raw data

Surgical Image Guidance and Healthcare Toolkit

Robust Chest CT Image Segmentation of COVID-19 Lung Infection based on limited data

A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant

The OHIF Medical Imaging Viewer is for viewing medical images. It can retrieve and load images from most sources and formats; render sets in 2D, 3D, and reconstructed representations; allows for the manipulation, annotation, and serialization of observations; supports internationalization, OpenID Connect, offline use, hotkeys, and many more features.

medical image visualization library and development toolkit

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

BisQue is an ML Platform for storing, analyzing, and visualizing your data all in the browser.

NumPy, SciPy, MRI and Music | Presented at ISMRM 2021 Sunrise Educational Session

Part of osmose that runs the analysis, and send the results to the frontend.

libmpv based application for quality control of videos

Easy way to define, execute and store quality rules for your data.

DICOM Viewer

☔ Integrate and observe the results of your CI/CD pipeline tools

TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.

nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without manual intervention. It includes guides for 12 data sets that were used to develop and evaluate the performance of the proposed method.

One-Shot Recognition of Manufacturing Defects in Steel Surfaces

PHP Static Analysis in Github Actions.

CS-Net (MICCAI 2019) and CS2-Net (MedIA 2020)

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠

MONAI Deploy aims to become the de-facto standard for developing, packaging, testing, deploying and running medical AI applications in clinical production.

Graph theory analysis of brain MRI data

Code samples for ESAPI and other Varian APIs and web services.

Comprehensive Plugin for composer to execute PHP Quality assurance Tools

An application displaying 2D/3D Dicom

Neural networks to segment some type of biomedical images

The PyTorch re-implement of a 3D CNN Tracker to extract coronary artery centerlines with state-of-the-art (SOTA) performance. (paper: 'Coronary artery centerline extraction in cardiac CT angiography using a CNN-based orientation classifier')

Attention Unet model with post process for retina optic disc segmention

Medical Image Vision Operators, such as RoIAlign, DCNv1, DCNv2 and NMS for both 2/3D images.

A high-level, easy-to-deploy non-uniform Fast Fourier Transform in PyTorch.

An implementation of the research paper "Retina Blood Vessel Segmentation Using A U-Net Based Convolutional Neural Network"

ggQC

Sequential patch-based segmentation for medical image

A deep learning framework for detecting lesions in CT scans from Deep Lesion dataset

Official PyTorch and MATLAB implementations of our MICCAI 2020 paper "FocusLiteNN: High Efficiency Focus Quality Assessment for Digital Pathology"

🎉 A curated list of awesome things related to Cypress

OpenGnsys (pronounced Open Genesis) is a free and open source project that provides tools for managing and deploying different operating systems.

Kidney Tumor Segmentation Challenge 2019

DICOM Image Segmentation with CNNs in Tensorflow

Real-time monitoring of Firefox release health

Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERT

Malaria Detection using Deep Learning from Images made available publicly from NIH