Top diffusion-mri open source projects

The open source toolbox for reproducible diffusion MRI-based microstructure estimation

✭ 58

python reproducible-research optimization neuroscience neuroimaging diffusion-mri noddi multi-shell microstructure-estimation noddi-bingham axcaliber spherical-mean-technique multi-compartment-modeling multi-echo-time microscopic-diffusion-imaging constrained-spherical-deconvolution multi-tissue-csd ball-and-stick ball-and-racket diffusion-time-dependence microstructure-imaging-in-crossings

dmriprep

dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

✭ 55

python TeX Dockerfile preprocessing bids diffusion-mri magnetic-resonance-imaging bids-apps

nlsam

The reference implementation for the Non Local Spatial and Angular Matching (NLSAM) denoising algorithm for diffusion MRI

✭ 19

python cython shell machine-learning diffusion-mri denoising-algorithm

MITK-Diffusion

MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit

qsiprep

Preprocessing and reconstruction of diffusion MRI

✭ 94

HTML python pipelines connectomics diffusion-mri tractography

Top 5 diffusion-mri open source projects