All Projects → 2020plus → Similar Projects or Alternatives

529 Open source projects that are alternatives of or similar to 2020plus

obi
The Ontology for Biomedical Investigations
Stars: ✭ 49 (+11.36%)
Mutual labels:  bioinformatics
flexidot
Highly customizable, ambiguity-aware dotplots for visual sequence analyses
Stars: ✭ 73 (+65.91%)
Mutual labels:  bioinformatics
OmiEmbed
Multi-task deep learning framework for multi-omics data analysis
Stars: ✭ 16 (-63.64%)
Mutual labels:  cancer
immunedb
ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data
Stars: ✭ 13 (-70.45%)
Mutual labels:  bioinformatics
SemiBin
No description or website provided.
Stars: ✭ 25 (-43.18%)
Mutual labels:  bioinformatics
crazydoc
Read DNA sequences from colourful Microsoft Word documents
Stars: ✭ 18 (-59.09%)
Mutual labels:  bioinformatics
Breast-Cancer-Scikitlearn
simple tutorial on Machine Learning with Scikitlearn
Stars: ✭ 33 (-25%)
Mutual labels:  random-forest
peppy
Project metadata manager for PEPs in Python
Stars: ✭ 29 (-34.09%)
Mutual labels:  bioinformatics
bio tools
Useful bioinformatic scripts
Stars: ✭ 35 (-20.45%)
Mutual labels:  bioinformatics
micca
micca - MICrobial Community Analysis
Stars: ✭ 19 (-56.82%)
Mutual labels:  bioinformatics
SumStatsRehab
GWAS summary statistics files QC tool
Stars: ✭ 19 (-56.82%)
Mutual labels:  bioinformatics
tiptoft
Predict plasmids from uncorrected long read data
Stars: ✭ 27 (-38.64%)
Mutual labels:  bioinformatics
ngstools
My own tools code for NGS data analysis (Next Generation Sequencing)
Stars: ✭ 28 (-36.36%)
Mutual labels:  bioinformatics
redbiom
Sample search by metadata and features
Stars: ✭ 27 (-38.64%)
Mutual labels:  bioinformatics
full spectrum bioinformatics
An open-access bioinformatics text
Stars: ✭ 26 (-40.91%)
Mutual labels:  bioinformatics
clustergrammer2-notebooks
Examples using Clustergrammer2 to explore high-dimensional datasets.
Stars: ✭ 35 (-20.45%)
Mutual labels:  bioinformatics
adversarial-relation-classification
Unsupervised domain adaptation method for relation extraction
Stars: ✭ 18 (-59.09%)
Mutual labels:  bioinformatics
MINTIE
Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
Stars: ✭ 24 (-45.45%)
Mutual labels:  cancer
orfipy
Fast and flexible ORF finder
Stars: ✭ 27 (-38.64%)
Mutual labels:  bioinformatics
virnet
VirNet: A deep attention model for viral reads identification
Stars: ✭ 26 (-40.91%)
Mutual labels:  bioinformatics
CATT
An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.
Stars: ✭ 17 (-61.36%)
Mutual labels:  bioinformatics
docker-builds
📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics
Stars: ✭ 84 (+90.91%)
Mutual labels:  bioinformatics
smartas
📓Notebook of Climente-González et al. (2017), The Functional Impact of Alternative Splicing in Cancer.
Stars: ✭ 13 (-70.45%)
Mutual labels:  cancer
picardmetrics
🚦 Run Picard on BAM files and collate 90 metrics into one file.
Stars: ✭ 38 (-13.64%)
Mutual labels:  bioinformatics
mulled
Mulled - Automatized Containerized Software Repository
Stars: ✭ 49 (+11.36%)
Mutual labels:  bioinformatics
Front-End
Federated Learning based Deep Learning. Docs: https://fets-ai.github.io/Front-End/
Stars: ✭ 35 (-20.45%)
Mutual labels:  cancer
companion
This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion
Stars: ✭ 21 (-52.27%)
Mutual labels:  bioinformatics
sapporo
A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification and a web application for managing and executing those WES services.
Stars: ✭ 17 (-61.36%)
Mutual labels:  bioinformatics
epiviz
EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding of correlations between various genome features.
Stars: ✭ 65 (+47.73%)
Mutual labels:  bioinformatics
awesome-small-molecule-ml
A curated list of resources for machine learning for small-molecule drug discovery
Stars: ✭ 54 (+22.73%)
Mutual labels:  bioinformatics
AMIDD
Introduction to Applied Mathematics and Informatics in Drug Discovery (AMIDD)
Stars: ✭ 13 (-70.45%)
Mutual labels:  bioinformatics
hotmap
WebGL Heatmap Viewer for Big Data and Bioinformatics
Stars: ✭ 13 (-70.45%)
Mutual labels:  bioinformatics
antigen.garnish
No description or website provided.
Stars: ✭ 34 (-22.73%)
Mutual labels:  bioinformatics
CAFE5
Version 5 of the CAFE phylogenetics software
Stars: ✭ 53 (+20.45%)
Mutual labels:  bioinformatics
polyRAD
Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
Stars: ✭ 16 (-63.64%)
Mutual labels:  bioinformatics
gene-oracle
Feature extraction algorithm for genomic data
Stars: ✭ 13 (-70.45%)
Mutual labels:  bioinformatics
lexicon-mono-seq
DOM Text Based Multiple Sequence Alignment Library
Stars: ✭ 15 (-65.91%)
Mutual labels:  bioinformatics
missRanger
R package "missRanger" for fast imputation of missing values by random forests.
Stars: ✭ 42 (-4.55%)
Mutual labels:  random-forest
bistro
A library to build and execute typed scientific workflows
Stars: ✭ 43 (-2.27%)
Mutual labels:  bioinformatics
2017 2018-single-cell-RNA-sequencing-Workshop-UCD UCB UCSF
2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
Stars: ✭ 31 (-29.55%)
Mutual labels:  bioinformatics
awesome-bioinformatics-formats
Curated list of bioinformatics formats and publications
Stars: ✭ 50 (+13.64%)
Mutual labels:  bioinformatics
nPhase
Ploidy agnostic phasing pipeline and algorithm
Stars: ✭ 18 (-59.09%)
Mutual labels:  bioinformatics
motifmatchr
Fast motif matching in R
Stars: ✭ 25 (-43.18%)
Mutual labels:  bioinformatics
MetaOmGraph
MetaOmGraph: a workbench for interactive exploratory data analysis of large expression datasets
Stars: ✭ 30 (-31.82%)
Mutual labels:  bioinformatics
linear-tree
A python library to build Model Trees with Linear Models at the leaves.
Stars: ✭ 128 (+190.91%)
Mutual labels:  random-forest
saffrontree
SaffronTree: Reference free rapid phylogenetic tree construction from raw read data
Stars: ✭ 17 (-61.36%)
Mutual labels:  bioinformatics
react-msa-viewer
React rerelease of MSAViewer
Stars: ✭ 15 (-65.91%)
Mutual labels:  bioinformatics
ntHash
Fast hash function for DNA sequences
Stars: ✭ 66 (+50%)
Mutual labels:  bioinformatics
PCG
𝙋𝙝𝙮𝙡𝙤𝙜𝙚𝙣𝙚𝙩𝙞𝙘 𝘾𝙤𝙢𝙥𝙤𝙣𝙚𝙣𝙩 𝙂𝙧𝙖𝙥𝙝 ⸺ Haskell program and libraries for general phylogenetic graph search
Stars: ✭ 20 (-54.55%)
Mutual labels:  bioinformatics
sc2-illumina-pipeline
Bioinformatics pipeline for SARS-CoV-2 sequencing at CZ Biohub
Stars: ✭ 18 (-59.09%)
Mutual labels:  bioinformatics
TypeTE
Genotyping of segregating mobile elements insertions
Stars: ✭ 15 (-65.91%)
Mutual labels:  bioinformatics
simplesam
Simple pure Python SAM parser and objects for working with SAM records
Stars: ✭ 50 (+13.64%)
Mutual labels:  bioinformatics
MMseqs2-App
MMseqs2 app to run on your workstation or servers
Stars: ✭ 16 (-63.64%)
Mutual labels:  bioinformatics
netSmooth
netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation
Stars: ✭ 23 (-47.73%)
Mutual labels:  bioinformatics
gff3toembl
Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI
Stars: ✭ 27 (-38.64%)
Mutual labels:  bioinformatics
snakefmt
The uncompromising Snakemake code formatter
Stars: ✭ 78 (+77.27%)
Mutual labels:  bioinformatics
weblogo
WebLogo 3: Sequence Logos redrawn
Stars: ✭ 106 (+140.91%)
Mutual labels:  bioinformatics
PhyloTrees.jl
Phylogenetic trees in Julia
Stars: ✭ 15 (-65.91%)
Mutual labels:  bioinformatics
dna-traits
A fast 23andMe genome text file parser, now superseded by arv
Stars: ✭ 64 (+45.45%)
Mutual labels:  bioinformatics
chromap
Fast alignment and preprocessing of chromatin profiles
Stars: ✭ 93 (+111.36%)
Mutual labels:  bioinformatics
61-120 of 529 similar projects