875 Open source projects that are alternatives of or similar to Packages

Arch Linux CN Repository

Archlinux and ArchlinuxARM Repository for Education

PKGBUILD's for antergos packages

Package normalization ruleset for Repology

You can use setupTermuxArch.bash 📲 to install Arch Linux in Amazon, Android, Chromebook and Windows. https://sdrausty.github.io/TermuxArch/docs/install

Build and distribute Linux packages from sources in an automatic, consistent and reproducible way #obs

Arch Linux CN Community repo mirrors list

Repology backend service to update repository and package data

Automatically create binary repositories from AUR packages

Repology web application

Build and maintain multiple custom conda environments all in once place.

Fast, safe and reliable transit for the delivery of software updates to users.

Linux/WSL config to optimize ergonomics, security, and productivity: vim/neovim, zsh, tmux, i3, emacs, vscode, ipython, jupyter, ranger, fzf, kitty, xkb, selfquant, firejail, systemd, etc

WebLogo 3: Sequence Logos redrawn

Earl Grey: A fully automated TE curation and annotation pipeline

The Ontology for Biomedical Investigations

A fast 23andMe genome text file parser, now superseded by arv

docsTermuxArch https://termuxarch.github.io/docsTermuxArch/

“ With wisdom comes the desire for simplicity.” Brendon Burchard.

Rust rewrite of Devour

Project metadata manager for PEPs in Python

The uncompromising Snakemake code formatter

For live demo, see http://lh3lh3.users.sourceforge.net/bioseq.shtml

De novo assembly based variant calling pipeline for Illumina short reads

CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology

GitHub Action that syncs package.json with the repository metadata.

Software for comparing contact maps from HiC, CaptureC and other 3D genome data.

MMseqs2 app to run on your workstation or servers

Curated list of bioinformatics formats and publications

A D library for computational biology and bioinformatics

𝙋𝙝𝙮𝙡𝙤𝙜𝙚𝙣𝙚𝙩𝙞𝙘 𝘾𝙤𝙢𝙥𝙤𝙣𝙚𝙣𝙩 𝙂𝙧𝙖𝙥𝙝 ⸺ Haskell program and libraries for general phylogenetic graph search

Phylogenetic trees in Julia

No description or website provided.

A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification and a web application for managing and executing those WES services.

📊 Identify cell types and pathways affected by genetic risk loci.

Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees in the UBC MSc Genetic Counselling Training Program, as they embark on a journey to learn about analyzing genomes.

Generate duplex/single consensus reads to reduce sequencing noises and remove duplications

ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data

Universal GNU+Linux installer script

micca - MICrobial Community Analysis

Predict plasmids from uncorrected long read data

Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests

Examples using Clustergrammer2 to explore high-dimensional datasets.

Dell Inspiron 15-3542 (3542-2538) with Fourth Gen Intel Core i3/i5/i7 optimized.

📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics

Molecular informatics toolkit with a comprehensive integration of bioinformatics and cheminformatics tools for drug discovery.

BACNET is a Java based platform to develop website for multi-omics analysis

VirNet: A deep attention model for viral reads identification

transparently build CWL and Galaxy XML tool definitions for any script that uses argparse

Make it easy to manage your local Arch Linux repository.

Gruvbox inspired Arch Linux i3wm rice.

🚦 Run Picard on BAM files and collate 90 metrics into one file.

🐶 A Deno registry browser in the terminal

The Microbiome Interpretable Temporal Rule Engine

Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously

Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGen…

Official Open Build Service Documentation. Content gets reviewed and edited. Generated books are available at http://www.openbuildservice.org

Introduction to the Unix Shell for biologists

The way of creating custom Arch dual-boot system without desktop environment with `no mouse` approach in mind.