12 open source projects by PacificBiosciences

FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries

PacBio Assembly Tool Suite: Reads in ⇨ Assembly out

Bioinformatics training resources

CCS: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)

Tools for detecting DNA modifications from single molecule, real-time sequencing data

A minimap2 frontend for PacBio native data formats

Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data

pb-metagenomics-tools

Minor Variant Calling and Phasing Tools

Robust Open Reading Frame prediction (ANGLE re-implementation)

Structural variant (SV) analysis tools

Miscellaneous scripts for applications of PacBio systems