312 Open source projects that are alternatives of or similar to FluentDNA

Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences

De novo assembly from Oxford Nanopore reads.

A collection of scripts and notes related to genomics and bioinformatics

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.

MView extracts and reformats the results of a sequence database search or multiple alignment.

Official git repository for Biopython (originally converted from CVS)

Fast and flexible ORF finder

UGENE is free open-source cross-platform bioinformatics software

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

A Go package for engineering organisms.

parallelized blat with multi-threads support

Data intensive science for everyone.

DOM Text Based Multiple Sequence Alignment Library

A Java API for high-throughput sequencing data (HTS) formats.

waka waka

Protein structure comparison tools such as SSAP and SNAP

Analysis pipelines for sequencing data

A package for designing compact and comprehensive capture probe sets.

Official code repository for GATK versions 4 and up

Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products

Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files

pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)

Framework for Metastatic And Clonal History INtegrative Analysis

A package for designing activity-informed nucleic acid diagnostics for viruses.

Blazor component library for FluentUI. Microsoft's official lightweight wrapper around the FluentUI Web Components for use with .NET 6.0 Blazor applications

Multilocus sequence typing by blast using the schemes from PubMLST

Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.

One media player for everything you own or stream; whether it's music or videos, online or offline Rise Media Player does it all. And it's beautiful and native with the latest version of WinUI.

The Modular Aligner and The Modular SV Caller

Whole Exome/Whole Genome Sequencing alignment pipeline

A fluent Java 8 DSL for building JSON documents.

Numerical Encoding for Human Genetic Variants

Same species annotation lift over pipeline.

AStarix: Fast and Optimal Sequence-to-Graph Aligner

MongoDB driver for Fluent

A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design

Fluent assertions for Python

tools for reading, writing, merging, and remapping SNPs

Software for prediction of plasmid sequences in metagenomic assemblies

G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.

Nanopore demultiplexing, QC and alignment pipeline

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

MTCNN implement by tensorflow. Easy to training and testing.

👤 Authentication and Authorization framework for Fluent.

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

Nightlight: Astronomic Image Processing

ProtVec can be used in protein interaction predictions, structure prediction, and protein data visualization.

Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)

Neural Networks for Protein Sequence Alignment

AppsFlyer OAID collection

📚 🔬 PIA - Protein Inference Algorithms

Lifterover copy number segments in whole

Sequence lineage information extracted from RKI sequence data repo

gargammel is an ancient DNA simulator

A high-performance Go client for Fluentd and Fluent Bit

Binomica Public Repository for Biological Parts