193 Open source projects that are alternatives of or similar to ALPS

Multi-omics analysis protocols by Lyu.

CWL tools and workflows for GGR

Reproducible reanalysis of a combined ChIP-Seq & RNA-Seq data set

Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline

Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.

A graphical user interface for distributed data processing of high throughput genomics

Code and instructions for making topographic maps of planets and moons

R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/

Edward Tufte-Inspired Slopegraphs

A Swiss version of the famous visualization «Land doesn't vote, people do.»

Monitor twitter stream

chromatin Variability Across Regions (of the genome!)

Simple parliament plots using ggplot2

Draw and share your software architecture without diagramming software. Uses d3.js and Angular.js.

A Power BI template that provides easy to understand, actionable flow metrics and predictive analytics for your agile teams using Azure DevOps, Azure DevOps Server and/or TFS.

✂️ Easy half-half geoms in ggplot2

Long-term analysis of emotion, age, and sentiment using Lifeslice and text records.

Venmo trasaction dataset for data analysis/visualization/anything

TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/

State of JS 2019 survey report website

Example datasets and dashboards known to work well in OmniSci

Code, data, and instructions to map every star you can see from Earth

Create D3 based SVG graphics easily from R

An exploration of New York Times crossword answers from 1994-2017, i.e. the Will Shortz era.

Interactive details-on-demand data visualizations at scale

A course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor

📊https://datav.io is a modern APM, provide observability for your business, application and infrastructure. It's also a lightweight alternative to Grafana.

A pure Rust visualization library inspired by D3.js

Data Visualization Charting Library

Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap

SVG patterns for Data Visualization.

📚 R interface to the Bio-Formats library

A charting library streamlined for building interactive visualizations for the Qlik product suites.

Computable build reports, package metadata, and download stats from the Bioconductor project

An open access book on scientific visualization using python and matplotlib

Convert between AnnData and SingleCellExperiment

A living, breathing community exploration of the gganimate R package. A rOpenSci #ozunconf2018 project

Code, data, and instructions for mapping the geology of the moon

The GeoDataViz Toolkit is a set of resources that will help you communicate your data effectively through the design of compelling visuals. In this repository we are sharing resources, assets and other useful links.

Materials on the analysis of microarray expression data; focus on re-analysis of public data ( http://tinyurl.com/cruk-microarray)

#teamchatviz

A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data

Create a cromphensive report of DEG list coming from any analysis of RNAseq data

3d plotting for Python in the Jupyter notebook based on IPython widgets using WebGL

HMMRATAC peak caller for ATAC-seq data

A visualization of the connections between Tory politicians and companies being awarded government contracts during the pandemic.

An interactive data visualization of the result of Indonesia's recent election built using D3.js and KawalPemilu API

Morph is a free and open-source tool for creating designs, animations or interactive visualizations from data.

MaAsLin2: Microbiome Multivariate Association with Linear Models

Code and instructions for making an animated map of Earth

📚 RDocumentation provides an easy way to search the documentation for every version of every R package on CRAN and Bioconductor.

Dex : The Data Explorer -- A data visualization tool written in Java/Groovy/JavaFX capable of powerful ETL and publishing web visualizations.

Matplotlib 3.1 cheat sheet.

build your palette from a picture √

An open source tool to quantify the world

Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

Support for jupyter notebook templates in jupyterlab

Customize Leaflet maps with a linked Google Sheets template and GeoJSON data on GitHub

Data exploration and visualisation for Elasticsearch and Splunk.

nivo provides a rich set of dataviz components, built on top of the awesome d3 and React libraries