598 Open source projects that are alternatives of or similar to Bioperl Live

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

🔬 BEDOPS: high-performance genomic feature operations

GenomeTools genome analysis system.

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang

Bootstrap Italia è un tema Bootstrap 4 conforme alle linee guida di design per i servizi web della PA

Remote protein homology detection suite.

A toolkit with common assertions and mocks that plays nicely with the standard library

Python for Bioinformatics

PDF Toolkit. 📎 🔨 🔧 ✂️ 📑 📁📎 🔖 🚧 👷

Deep Learning toolkit for Computer Vision.

Reads simulator

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Ultrafast de novo assembly for long noisy reads (though having no consensus step)

karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

An overview of algorithms for estimating pseudotime in single-cell RNA-seq data

Protein Graph Library

Cross-Platform GUI Toolkit (stable)

Full color painting software for Unix-like systems for illustration drawing. This is un-official little fixed repository for package maintainers of image editor AzPainter (based on "mlib" toolkit). Official repository - http://azsky2.html.xdomain.jp/arc/download.html

Quickly search, compare, and analyze genomic and metagenomic data sets.

Rapid large-scale prokaryote pan genome analysis

A Modular Optimization framework for Localization and mApping (MOLA)

⚡ RAN! React . GraphQL . Next.js Toolkit ⚡ - SEO-Ready, Production-Ready, SSR, Hot-Reload, CSS-in-JS, Caching, CLI commands and more...

Curated (meta)list of resources for Biology.

An ultrafast memory-efficient short read aligner

Intuitive local web frontend for the BLAST bioinformatics tool

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Python package for graph neural networks in chemistry and biology

SpiceyPy: a Pythonic Wrapper for the SPICE Toolkit.

RAxML Next Generation: faster, easier-to-use and more flexible

Examples of using deep learning in Bioinformatics

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

React component for Cytoscape.js network visualisations

Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data

A genome browser that shows long reads and complex variants better

A curated list of resources for learning bioinformatics.

Deep learning infrastructure for bioinformatics

Analytical Web Apps for Python, R, Julia, and Jupyter. No JavaScript Required.

Toolset for SV simulation, comparison and filtering

A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

Ten Quick Tips for Deep Learning in Biology

cython + htslib == fast VCF and BCF processing

Genome assembly evaluation tool

Proof-of-concept seq-to-graph mapper and graph generator

Cuneiform distributed programming language

The Official Mixed Reality Framework for Unity

goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary

code for reading and processing Allen Institute for Brain Science data

Annotated data.

🍺🔬 Bioinformatics formulae for the Homebrew package manager (macOS and Linux)

A repository for setting up a RNAseq workflow

Modern Phishing Tool With Advanced Functionality And Multiple Tunnelling Services [ Android-Support-Available ]

Phonia Toolkit is one of the most advanced toolkits to scan phone numbers using only free resources. The goal is to first gather standard information such as country, area, carrier and line type on any international phone numbers with a very good accuracy.

Functional programming toolkit for building server applications in Scala.

Strongly typed front-end framework

A set of utils for faster development of GraphQL tools

Qtools is a collection of utilities to aid development with CommonQt

facebook hacking toolkit

Pokémon (3DS) ROM Editor & Randomizer

Strelka2 germline and somatic small variant caller