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→ BioJulia
13 open source projects by BioJulia
[ Open user page on Github ]
1.
Automa.jl
A julia code generator for regular expressions
✭ 111
julia
regular-expression
2.
Biosequences.jl
Biological sequences for the julia language
✭ 77
julia
bioinformatics
biology
3.
Genomicfeatures.jl
Tools for genomic features in Julia.
✭ 22
julia
4.
Bio.jl
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
✭ 257
julia
bioinformatics
deprecated
genomics
biology
dna
5.
FMIndexes.jl
FM-index for full-text search
✭ 17
julia
6.
BioServices.jl
Julia interface to APIs for various bio-related web services
✭ 17
julia
7.
BioAlignments.jl
Sequence alignment tools
✭ 49
julia
bam-files
bioinformatics
biology
high-throughput-sequencing
dna-sequences
sequence-alignment
sequence-analysis
biojulia
smith-waterman-alignment
sam-files
8.
BioFmtSpecimens
A collection of bioinformatics file format specimens to test against
✭ 36
Roff
9.
BioTutorials
Tutorial Notebooks of BioJulia
✭ 23
Jupyter Notebook
julia
10.
SubstitutionModels.jl
Biological Sequence Substitution Models for Julia
✭ 13
julia
bioinformatics
phylogenetics
substitution-models
11.
GeneticVariation.jl
Datastructures and algorithms for working with genetic variation
✭ 33
julia
bioinformatics
snps
biology
mutation
polymorphism
variation
12.
BufferedStreams.jl
Fast composable IO streams
✭ 36
julia
13.
Libz.jl
Fast, flexible zlib bindings.
✭ 26
julia
gzip
zlib
1-13
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13
user projects