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Top 8 dna-sequences open source projects

Read DNA sequences from colourful Microsoft Word documents

✭ 18

python bioinformatics synthetic-biology molecular-biology dna-sequences computer-aided-design

🍶Genome assembly with short sequence reads

✭ 20

perl python shell dna-sequences genome-scaffolding short-reads sequence-assembly genome-assembler read-pairs

A python wrapper for the benchling api

✭ 39

python CSS Makefile HTML Batchfile dna api-wrapper dna-sequences

enformer-pytorch

Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch

✭ 146

python deep-learning genomics gene-expression artificial-intelligence transformer attention-mechanism dna-sequences

G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.

✭ 52

C++c shell M4 javascript Cuda bioinformatics gpu high-performance cuda nvidia dna high-performance-computing dna-sequences ncbi-blast blastn dna-alignment

Binomica Public Repository for Biological Parts

✭ 21

genetics biology dna parts dna-sequences biotechnology

BioAlignments.jl

Sequence alignment tools

✭ 49

julia bam-files bioinformatics biology high-throughput-sequencing dna-sequences sequence-alignment sequence-analysis biojulia smith-waterman-alignment sam-files

TensorFlow-DNNs-for-Predicting-DNA-Transcription-Factor-Binding

Deep neural networks implemented in TensorFlow & Python for predicting whether transcription factors will bind to given DNA sequences

✭ 13

python machine-learning bioinformatics transcription-factors deep-neural-networks tensorflow dna-sequences

1-8 of 8 dna-sequences projects