GitPlanet
Projects
Users
Categories
Languages
About
All Categories
→
No Category
→ sequence-analysis
Top 9 sequence-analysis open source projects
chromap
Fast alignment and preprocessing of chromatin profiles
✭ 93
C++
c
Roff
Makefile
bioinformatics
genomics
sequence-analysis
chromatin-profiles
flexidot
Highly customizable, ambiguity-aware dotplots for visual sequence analyses
✭ 73
python
visualization
bioinformatics
biology
longest-common-subsequence
sequence-analysis
dotplot
repetitive-dna
pairwise-comparisons
lasagne4bio
No description or website provided.
✭ 103
Jupyter Notebook
python
deep-learning
biology
sequence-analysis
BioAlignments.jl
Sequence alignment tools
✭ 49
julia
bam-files
bioinformatics
biology
high-throughput-sequencing
dna-sequences
sequence-alignment
sequence-analysis
biojulia
smith-waterman-alignment
sam-files
wub
Tools and software library developed by the ONT Applications group
✭ 57
python
Makefile
nanopore
sequence-analysis
nanopore-sequencing
SNPGenie
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
✭ 81
perl
r
evolution
next-generation-sequencing
vcf
population-genetics
dnds-estimation
molecular-evolution
nucleotide
fasta-sequences
vcf-files
diversity-measurement
sequence-analysis
dnds
natural-selection
snp-report
nucleotide-diversity
evolutionary-parameters
substitution-rate
nei-gojobori
spacepharer
SpacePHARER CRISPR Spacer Phage-Host pAiRs findER
✭ 30
c
C++
shell
CMake
Makefile
HTML
bioinformatics
crispr
sequence-analysis
host-pathogen
gfapy
Gfapy: a flexible and extensible software library for handling sequence graphs in Python
✭ 54
python
bioinformatics
graphs
gfa
sequence-analysis
kalign
A fast multiple sequence alignment program.
✭ 89
c
CMake
Roff
C++
bioinformatics
sequence-alignment
sequence-analysis
1-9
of
9
sequence-analysis projects