Top 8 protein-design open source projects

RosettaDesign using PyRosetta

Rosetta FunFolDes – a general framework for the computational design of functional proteins.

Fitness landscape exploration sandbox for biological sequence design.

Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

Guided Conditional Wasserstein GAN for De Novo Protein Design

A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design

Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure