1047 Open source projects that are alternatives of or similar to Fieldtrip

Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)

Multi-modal Image Registration And Connectivity anaLysis

MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

A multi-purpose GPU-accelerated open-source suite for brain data visualization

python implementations of Analyzing Neural Time Series Textbook

MNE-CPP: A Framework for Electrophysiology

MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.

Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data

Schema and data analyzer for MongoDB written in Go.

An open software package to develop BCI based brain and cognitive computing technology for recognizing user's intention using deep learning

Visualizer for large-scale and interactive ray-tracing of neurons

Microstate EEGlab toolbox

A curated list of awesome neuroscience libraries, software and any content related to the domain.

A list of tutorials and other resources useful to learn open science and neuroimaging, EEG and MEG

Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.

Python machine learning package based on sklearn API for multivariate data processing and statistical analysis of symmetric positive definite matrices via Riemannian geometry

Automated 3D brain registration with support for multiple species and atlases.

NEURON User Interface

EEGLAB is an open source signal processing environment for electrophysiological signals running on Matlab and developed at the SCCN/UCSD

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠

MATLAB/Octave GIfTI Library

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

A virtual optogenetics laboratory

Android SDK for the NeuroSky MindWave Mobile Brainwave Sensing Headset

AntroPy: entropy and complexity of (EEG) time-series in Python

3D Visualization of Brain MRI

An R package for experimental psychologists

A lightweight python module to interact with atlases for systems neuroscience

medical image visualization library and development toolkit

Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project

Brain Imaging Analysis Kit

📊 The statistical analysis tool for git repositories

🎓 Tidy tools for academics

A Parametric Framework to Generate Visual Illusions using Python

A lightweight I/O utility for the BrainVision data format, written in Python.

Graph theory analysis of brain MRI data

A publicly-editable collection of open computational neuroscience resources

Method container for computational neuroscience on brains.

NeuroInformatics Database

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

Core methods and structures for neuroscience research in Julia.

The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on circuit mechanisms underlying EEG/MEG data.

Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure

🔧🧠 MEEGkit: MEG & EEG processing toolkit in Python 🧠🔧

The open source toolbox for reproducible diffusion MRI-based microstructure estimation

Fusion ICA Toolbox (MATLAB)

Neuroimaging in Julia

MATLAB / Octave tools for BIDS datasets

Software platform for clinical neuroimaging studies

Slides, paper notes, class notes, blog posts, and research on ML 📉, statistics 📊, and AI 🤖.

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

Blackrock Microsystems Cerebus Link for Neural Signal Processing

Pretty CSS analytics on the CLI

CS198-96: Intro to Neurotechnology @ UC Berkeley

Mother of All BCI Benchmarks

A terminal app written in Node.js to monitor brain signals in real-time

Example with Cortex V2 API

Python package for covariance matrices manipulation and Biosignal classification with application in Brain Computer interface

A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).