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Top 24 image-registration open source projects

BIRL: Benchmark on Image Registration methods with Landmark validations

Image-and-Spatial Transformer Networks

✭ 86

python deep-learning medical-imaging image-registration spatial-transformer-networks

dataset-histology-landmarks

Dataset: landmarks for registration of histology images

✭ 26

python shell dataset medical-imaging landmarks image-registration histology anhir

MATLAB Elastix wrapper

✭ 21

matlab image-registration elastix

Fourier-Analysis-Digital-Images

Fourier analysis applications for image matching.

✭ 18

matlab ssd noise image-registration fourier-analysis cross-correlation imagematching

Image-Restoration

Image registration using pytorch

✭ 26

python unet image-registration image-restoration

ACRN Chest X-ray IA

Learning Deformable Registration of Medical Images with Anatomical Constraints

✭ 18

python machine-learning deep-learning image-registration medical-images image-alignment anatomical-constraints

VoxelMorph-PyTorch

An unofficial PyTorch implementation of VoxelMorph- An unsupervised 3D deformable image registration method

✭ 68

python pytorch image-registration ieeetran cvpr2018 spatial-transformer-networks deformable-image-registration voxel-morph

Predictive Image Registration

✭ 117

C++matlab python Cuda shell CMake deep-learning image-registration

Multi-modal Image Registration And Connectivity anaLysis

✭ 23

python shell ImageJ Macro network neuroscience mri connectivity neuroimaging image-segmentation brain image-registration biomedical clarity atlases

Joint Semi-supervised Learning of Image Registration and Segmentation

✭ 38

python semi-supervised-learning image-segmentation image-registration medical-image-analysis

[CVPR2020] Unsupervised Multi-Modal Image Registration via Geometry Preserving Image-to-Image Translation

✭ 120

python shell matlab deep-learning cnn pytorch multi-modal image-registration affine-transformation stn image-to-image-translation multimodal deformable-transformation multi-modal-learning cvpr2020 registartion multimodal-image-registration

SASHIMI segmentation is a Matlab App for semi-automatic interactive segmentation of multi-slice images.

✭ 15

matlab shell image-processing segmentation image-registration matlab-gui mri-segmentation matlab-app-designer

TransMorph Transformer for Medical Image Registration

TransMorph: Transformer for Unsupervised Medical Image Registration (PyTorch)

✭ 130

python Jupyter Notebook deep-learning transformer diffeomorphism image-registration bayesian-deep-learning image-alignment vision-transformer swin-transformer

Constrained Large Deformation Diffeomorphic Image Registration (CLAIRE)

✭ 30

C++Cuda c shell CMake Makefile parallel-computing medical-image-computing image-registration

Flexible Algorithms for Image Registration

✭ 103

matlab C++c matching image-processing toolbox medical-imaging alignment image-registration

An R interface to the NiftyReg medical image registration library

✭ 32

C++r c transformations medical-imaging image-registration

ViT-V-Net for 3D Image Registration Pytorch

Vision Transformer for 3D medical image registration (Pytorch).

✭ 169

python convolutional-neural-networks image-registration pytorch-implementation vision-transformer

Nightlight: Astronomic Image Processing

✭ 25

go javascript assembly astronomy image-processing alignment image-registration stacking fits astrophotography

Vessel-Segmentation-MR-Registration

The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use the segmented carotid to extract Time-Activity-Curve from PET images. It mainly involves 3D image coregistration, vessel segmentation, partial valume correction.

✭ 19

matlab image-processing image-registration vessel-segmentation partial-volume-correction

TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.

✭ 29

C++CMake python jupyter-notebook neuroscience image-registration vessel-segmentation medical-image-processing

A Python implementation of the model described in our publication "A convolutional neural network for common-coordinate registration of high-resolution histology images" developed principally for applications to registration of spatial transcriptomics image data.

✭ 18

python Jupyter Notebook neural-networks image-registration spatial-transcriptomics tissue-registration visium-st

Modular Tracking Framework

✭ 99

C++CMake Makefile c python tracking thesis paper ros decomposition image-registration homography mtf

Joint-Motion-Estimation-and-Segmentation

[MICCAI'18] Joint Learning of Motion Estimation and Segmentation for Cardiac MR Image Sequences

✭ 45

python machine-learning deep-learning segmentation optical-flow unsupervised-learning image-registration motion-estimation motion-tracking cardiac-motion

1-24 of 24 image-registration projects