ArtemisArtemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
Role2vecA scalable Gensim implementation of "Learning Role-based Graph Embeddings" (IJCAI 2018).
TiddlyresearchLocal and Anki-compatible note-taking tool based on TiddlyWiki
ScoutScout - Instruction based research debugger (a poor man's debugger)
EmpiricalstandardsEmpirical standards for conducting and evaluating research in software engineering
ReadingA list of computer-science readings I recommend
CirclatorA tool to circularize genome assemblies
ZotsiteExport Zotero to a stand-alone web site
PymbarPython implementation of the multistate Bennett acceptance ratio (MBAR)
GuideA workspace for research teams
RasalitVisualizations and helpers to improve and debug machine learning models for Rasa Open Source
AribaAntimicrobial Resistance Identification By Assembly
MsnoiseA Python Package for Monitoring Seismic Velocity Changes using Ambient Seismic Noise | http://www.msnoise.org
K8s Fah⛑ Run [email protected] on Kubernetes
Morphogenesis ResourcesComprehensive list of resources on the topic of digital morphogenesis (the creation of form through code). Includes links to major articles, code repos, creative projects, books, software, and more.
TheseusA modern experimental OS written from scratch in Rust to explore novel OS structure, state management techniques, and how to maximally leverage the power of language by shifting OS responsibilities into the compiler.
Pyndripyndri is a Python interface to the Indri search engine.
Spam Bot 3000Social media research and promotion, semi-autonomous CLI bot
Network Threats TaxonomyMachine Learning based Intrusion Detection Systems are difficult to evaluate due to a shortage of datasets representing accurately network traffic and their associated threats. In this project we attempt at solving this problem by presenting two taxonomies
Hyperlearn50% faster, 50% less RAM Machine Learning. Numba rewritten Sklearn. SVD, NNMF, PCA, LinearReg, RidgeReg, Randomized, Truncated SVD/PCA, CSR Matrices all 50+% faster
Python nlp tutorialThis repository provides everything to get started with Python for Text Mining / Natural Language Processing (NLP)
Ai Residency ListList of AI Residency & Research programs, Ph.D Fellowships, Research Internships
Awesome Research🌱 a curated list of tools to help you with your research/life; I built a front end around this repo, please use the link below
GubbinsRapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Fhe Toolkit LinuxIBM Fully Homomorphic Encryption Toolkit For Linux. This toolkit is a Linux based Docker container that demonstrates computing on encrypted data without decrypting it! The toolkit ships with two demos including a fully encrypted Machine Learning inference with a Neural Network and a Privacy-Preserving key-value search.
Vln CeVision-and-Language Navigation in Continuous Environments using Habitat
Turnoff Namuwiki조별과제 때마다 "나무위키 꺼라."라고 말하시는게 피곤하신 여러분을 위해 만들어진 Browser Extension, 나무위키를 꺼 드립니다.
Research📚 A compilation of research relevant to Data Together's efforts tackling the general problem of data resilience & interactivity
WhitehatInformation about my experiences on ethical hacking 💀
Eddsa Fault AttackFault attack agaisnt EdDSA demonstrated on an Arduino Nano board, allowing for partial key recovery and fake signatures.
Holodeck EngineHigh Fidelity Simulator for Reinforcement Learning and Robotics Research.
CapsgnnA PyTorch implementation of "Capsule Graph Neural Network" (ICLR 2019).
IngraphIncremental view maintenance for openCypher graph queries.
AlignmentdurationLyrics-to-audio-alignement system. Based on Machine Learning Algorithms: Hidden Markov Models with Viterbi forced alignment. The alignment is explicitly aware of durations of musical notes. The phonetic model are classified with MLP Deep Neural Network.
How2sketchCode for paper “How2Sketch: generating easy-to-follow tutorials for sketching 3D objects.” I3D (2017)
OphidianOphidian's Mirror Repository on github. https://gitlab.com/eclufsc/eda/ophidian
Fast prototypeThis is a machine learning framework that enables developers to iterate fast over different ML architecture designs.